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靶向投影 NMR 光谱法用于复杂混合物的代谢物无歧义分析。

Targeted projection NMR spectroscopy for unambiguous metabolic profiling of complex mixtures.

机构信息

Université de Lyon, CNRS/ENS Lyon/UCB-Lyon 1, Centre de RMN à très hauts champs, 5 rue de la Doua, 69100 Villeurbanne, France.

出版信息

Magn Reson Chem. 2010 Sep;48(9):727-33. doi: 10.1002/mrc.2661.

DOI:10.1002/mrc.2661
PMID:20648569
Abstract

Unambiguous identification of individual metabolites present in complex mixtures such as biofluids constitutes a crucial prerequisite for quantitative metabolomics, toward better understanding of biochemical processes in living systems. Increasing the dimensionality of a given NMR correlation experiment is the natural solution for resolving spectral overlap. However, in the context of metabolites, natural abundance acquisition of (1)H and (13)C NMR data virtually excludes the use of higher dimensional NMR experiments (3D, 4D, etc.) that would require unrealistically long acquisition times. Here, we introduce projection NMR techniques for studies of complex mixtures, and we show how discrete sets of projection spectra from higher dimensional NMR experiments are obtained in a reasonable time frame, in order to capture essential information necessary to resolve assignment ambiguities caused by signal overlap in conventional 2D NMR spectra. We determine optimal projection angles where given metabolite resonances will have the least overlap, to obtain distinct metabolite assignment in complex mixtures. The method is demonstrated for a model mixture composition made of ornithine, putrescine and arginine for which acquisition of a single 2D projection of a 3D (1)H-(13)C TOCSY-HSQC spectrum allows to disentangle the metabolite signals and to access to complete profiling of this model mixture in the targeted 2D projection plane.

摘要

在生物流体等复杂混合物中,明确鉴定存在的个体代谢物是定量代谢组学的关键前提,有助于更好地理解生物系统中的生化过程。增加给定 NMR 相关实验的维度是解决光谱重叠的自然解决方案。然而,就代谢物而言,(1)H 和(13)C NMR 数据的天然丰度采集实际上排除了使用更高维度的 NMR 实验(3D、4D 等),这些实验需要不切实际的长时间采集。在这里,我们引入了用于复杂混合物研究的投影 NMR 技术,并展示了如何在合理的时间框架内从更高维度的 NMR 实验中获得离散的投影光谱集,以捕获解决常规 2D NMR 光谱中信号重叠引起的分配歧义所需的基本信息。我们确定了最优的投影角度,使给定的代谢物共振具有最小的重叠,以在复杂混合物中获得明确的代谢物分配。该方法针对由鸟氨酸、腐胺和精氨酸组成的模型混合物进行了演示,对于该混合物,只需采集单个 3D(1)H-(13)C TOCSY-HSQC 光谱的二维投影,即可分离代谢物信号,并在目标二维投影平面上对该模型混合物进行完整的剖析。

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