Hoot Samantha J, Brown Ryan P, Oliver Brian G, White Theodore C
Seattle Biomedical Research Institute, Seattle, WA 98109, USA.
Eukaryot Cell. 2010 Sep;9(9):1354-62. doi: 10.1128/EC.00130-10. Epub 2010 Jul 23.
In Candida albicans, ergosterol biosynthetic genes, including ERG11, which encodes the target of azole antifungal drugs, are regulated by the transcriptional regulator Upc2p. To initially characterize the promoter of the UPC2 gene, 5' rapid amplification of cDNA ends was used to identify two transcriptional initiation sites upstream of the ATG codon. The regions within the UPC2 promoter required for azole regulation of the UPC2 promoter were then identified using nested deletions fused to a luciferase reporter which were tested for azole inducibility in wild-type (WT) and upc2Delta/upc2Delta strains. Two distinct regions important for azole induction were identified: a Upc2p-dependent region (UDR) between bp -450 and -350 upstream of the ATG codon and a Upc2p-independent region (UIR) between bp -350 and -250 upstream of the ATG codon. Within the UDR, loss or mutation of the sterol response element (SRE), so named because of homology to the Saccharomyces cerevisiae Upc2p binding site, resulted in a decrease in both basal and induced expression in the WT strain but did not affect azole inducibility in the upc2Delta/upc2Delta deletion strain. Gel shift analyses using the DNA binding domain of Upc2p confirmed binding of the protein to two SRE-related sequences within the UPC2 promoter, with strongest binding to the UDR SRE. Detailed gel shift analyses of the UDR SRE shows that Upc2p binds to a bipartite element within the UPC2 promoter, including the previously identified SRE and a new, adjacent element, the short direct repeat (SDR), with partial homology to the SRE.
在白色念珠菌中,麦角固醇生物合成基因,包括编码唑类抗真菌药物作用靶点的ERG11,受转录调节因子Upc2p调控。为初步表征UPC2基因的启动子,采用5' cDNA末端快速扩增法鉴定了ATG密码子上游的两个转录起始位点。然后,使用与荧光素酶报告基因融合的嵌套缺失片段,在野生型(WT)和upc2Delta/upc2Delta菌株中检测唑类诱导性,从而确定UPC2启动子的唑类调节所需区域。鉴定出两个对唑类诱导重要的不同区域:ATG密码子上游-450至-350碱基对之间的Upc2p依赖区域(UDR)和ATG密码子上游-350至-250碱基对之间的Upc2p非依赖区域(UIR)。在UDR内,固醇反应元件(SRE)的缺失或突变(因其与酿酒酵母Upc2p结合位点具有同源性而得名)导致WT菌株的基础表达和诱导表达均降低,但不影响upc2Delta/upc2Delta缺失菌株中的唑类诱导性。使用Upc2p的DNA结合结构域进行的凝胶迁移分析证实,该蛋白与UPC2启动子内的两个SRE相关序列结合,与UDR SRE的结合最强。对UDR SRE的详细凝胶迁移分析表明,Upc2p与UPC2启动子内的一个二分元件结合,包括先前鉴定的SRE和一个新的相邻元件,即短直接重复序列(SDR),与SRE具有部分同源性。