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HIV-1 Vpu 蛋白跨膜片段在磷脂双层中的寡聚状态和超分子结构。

Oligomerization state and supramolecular structure of the HIV-1 Vpu protein transmembrane segment in phospholipid bilayers.

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520, USA.

出版信息

Protein Sci. 2010 Oct;19(10):1877-96. doi: 10.1002/pro.474.

Abstract

HIV-1 Vpu is an 81-residue protein with a single N-terminal transmembrane (TM) helical segment that is involved in the release of new virions from host cell membranes. Vpu and its TM segment form ion channels in phospholipid bilayers, presumably by oligomerization of TM helices into a pore-like structure. We describe measurements that provide new constraints on the oligomerization state and supramolecular structure of residues 1-40 of Vpu (Vpu(1-40)), including analytical ultracentrifugation measurements to investigate oligomerization in detergent micelles, photo-induced crosslinking experiments to investigate oligomerization in bilayers, and solid-state nuclear magnetic resonance measurements to obtain constraints on intermolecular contacts between and orientations of TM helices in bilayers. From these data, we develop molecular models for Vpu TM oligomers. The data indicate that a variety of oligomers coexist in phospholipid bilayers, so that a unique supramolecular structure can not be defined. Nonetheless, since oligomers of various sizes have similar intermolecular contacts and orientations, molecular models developed from our data are most likely representative of Vpu TM oligomers that exist in host cell membranes.

摘要

HIV-1 Vpu 是一种 81 个残基的蛋白,具有一个单一的 N 端跨膜(TM)螺旋片段,该片段参与从宿主细胞膜释放新的病毒粒子。Vpu 及其 TM 片段在磷脂双层中形成离子通道,推测通过 TM 螺旋的寡聚化为孔状结构。我们描述了对 Vpu(Vpu(1-40))残基 1-40 的寡聚状态和超分子结构提供新约束的测量,包括用于研究胶束中寡聚化的分析超速离心测量、用于研究双层中寡聚化的光诱导交联实验以及用于获得双层中 TM 螺旋之间的分子间接触和取向的约束的固态核磁共振测量。根据这些数据,我们为 Vpu TM 寡聚体开发了分子模型。这些数据表明,各种寡聚体在磷脂双层中共存,因此不能定义独特的超分子结构。尽管如此,由于各种大小的寡聚体具有相似的分子间接触和取向,因此我们数据中开发的分子模型很可能代表存在于宿主细胞膜中的 Vpu TM 寡聚体。

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本文引用的文献

1
Folding Simulations of the Transmembrane Helix of Virus Protein U in an Implicit Membrane Model.
J Chem Theory Comput. 2007 Nov;3(6):2335-46. doi: 10.1021/ct700103k.
2
Tetherin inhibits HIV-1 release by directly tethering virions to cells.
Cell. 2009 Oct 30;139(3):499-511. doi: 10.1016/j.cell.2009.08.039.
3
HIV-1 Vpu neutralizes the antiviral factor Tetherin/BST-2 by binding it and directing its beta-TrCP2-dependent degradation.
PLoS Pathog. 2009 Sep;5(9):e1000574. doi: 10.1371/journal.ppat.1000574. Epub 2009 Sep 4.
6
Reconstructing potentials of mean force from short steered molecular dynamics simulations of Vpu from HIV-1.
J Biomol Struct Dyn. 2009 Aug;27(1):1-12. doi: 10.1080/07391102.2009.10507291.
8
Vpu matchmakers as a therapeutic strategy for HIV infection.
PLoS Pathog. 2009 May;5(5):e1000246. doi: 10.1371/journal.ppat.1000246. Epub 2009 May 29.
10
Mutation of a single residue renders human tetherin resistant to HIV-1 Vpu-mediated depletion.
PLoS Pathog. 2009 May;5(5):e1000443. doi: 10.1371/journal.ppat.1000443. Epub 2009 May 22.

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