Biomedicinal Information Research Center, National Institute of Advanced Industrial Science and Technology, Aomi 2-3-26, Koto-ku, Tokyo 135-0064, Japan.
Prog Biophys Mol Biol. 2010 Sep;103(1):111-21. doi: 10.1016/j.pbiomolbio.2010.05.002. Epub 2010 May 26.
The NaChBac is a prokaryotic homologue of the voltage-gated sodium channel found in the genome of the alkalophilic bacterium Bacillus halodurans C-125. Like a repeating cassette of mammalian sodium channel, the NaChBac possesses hydrophobic domains corresponding to six putative transmembrane segments and a pore loop, and exerts channel function by forming a tetramer although detailed mechanisms of subunit assembly remain unclear. We generated truncated mutants from NaChBac, and investigated their ability to form tetramers in relation to their channel functions. A mutant that deletes almost all of the C-terminal coiled-coil structure lost its voltage-dependent ion permeability, although it was properly translocated to the cell surface. The mutant protein was purified as a tetramer using a reduced concentration of detergent, but the association between the subunits was shown to be much weaker than the wild type. The chemical cross-linking, blue native PAGE, sedimentation velocity experiments, size exclusion chromatography, immunoprecipitation, and electron microscopy all supported its tetrameric assembly. We further purified the C-terminal cytoplasmic domain alone and confirmed its self-oligomerization. These data suggest that the C-terminal coiled-coil structure stabilizes subunit-to-subunit interactions of NaChBac, but is not critical for their tetramer formation.
NaChBac 是嗜堿杆菌 Bacillus halodurans C-125 基因组中发现的电压门控钠离子通道的原核同系物。与哺乳动物钠离子通道的重复盒一样,NaChBac 具有对应于六个假定跨膜片段和一个孔环的疏水区,尽管亚基组装的详细机制仍不清楚,但通过形成四聚体发挥通道功能。我们从 NaChBac 生成截断突变体,并研究了它们与通道功能相关的形成四聚体的能力。删除几乎所有 C 端卷曲螺旋结构的突变体失去了电压依赖性离子通透性,尽管它被正确地转运到细胞表面。该突变体蛋白使用降低的去污剂浓度作为四聚体进行纯化,但亚基之间的缔合比野生型弱得多。化学交联、蓝色 nativePAGE、沉降速度实验、分子筛层析、免疫沉淀和电子显微镜都支持其四聚体组装。我们进一步纯化了单独的 C 端胞质结构域,并证实了其自身寡聚化。这些数据表明 C 端卷曲螺旋结构稳定了 NaChBac 的亚基间相互作用,但对于它们的四聚体形成不是关键的。