Department of Physical Chemistry, University of Venice Ca' Foscari, Dorsoduro 2137, 30123, Venice, Italy.
Amino Acids. 2011 Feb;40(2):713-20. doi: 10.1007/s00726-010-0708-y. Epub 2010 Aug 5.
Kinetic measurements of a novel copper-dependent amine oxidase, purified from rat liver mitochondria matrix, were carried out using various substrates in a large pH (5.6-10.2) and ionic strength range (5-200 mM), in order to study the docking of substrates to the enzyme and, as a consequence, to verify the physicochemical characteristics of the active site. Relatively small changes of V(max) values (approx. 2.5-folds) over the substrates tested, suggest that the rate determining step of the catalysis is only slightly affected by amine chemical structure. In contrast, the strong change of K(M) and k(c)/K(M) values (approx. two orders of magnitude) indicates electrostatic control of the docking process, since the changes of K(M) and k(c)/K(M) values appear due to the presence of positively charged groups in the substrate molecules. These results suggest the presence in the enzyme active site of two negatively charged amino acid residues which seem to interact with positively charged groups of the substrate molecules. Analogies and differences with bovine serum amine oxidase are also described.
采用动力学方法,在较大的 pH(5.6-10.2)和离子强度范围(5-200 mM)下,研究了从大鼠肝线粒体基质中纯化得到的新型铜依赖性胺氧化酶对各种底物的动力学参数,以研究底物与酶的结合情况,并由此验证酶活性中心的理化特征。在测试的底物中,Vmax 值的相对较小变化(约 2.5 倍)表明,催化的速率决定步骤仅受到胺化学结构的轻微影响。相比之下,K(M) 和 k(c)/K(M) 值的强烈变化(约两个数量级)表明静电控制了结合过程,因为 K(M)和 k(c)/K(M) 值的变化是由于底物分子中存在带正电荷的基团。这些结果表明,在酶的活性中心存在两个带负电荷的氨基酸残基,它们似乎与底物分子的带正电荷基团相互作用。还描述了与牛血清胺氧化酶的相似性和差异。