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ADP核糖基转移酶HopU1的结晶及初步晶体学分析

Crystallization and preliminary crystallographic analysis of the ADP-ribosyltransferase HopU1.

作者信息

Lin Yan, Wang Ping, Yang Huirong, Xu Yanhui

机构信息

School of Life Sciences, Fudan University, 220 Han-Dan Road, Shanghai 200433, People's Republic of China.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Aug 1;66(Pt 8):932-4. doi: 10.1107/S1744309110022463. Epub 2010 Jul 29.

Abstract

Several Gram-negative pathogens of plants and animals and some eukaryotic associated bacteria use type III protein-secretion systems (T3SSs) to deliver bacterial virulence-associated ;effector' proteins directly into host cells. HopU1 is a type III effector protein from the plant pathogen Pseudomonas syringae, which causes plant bacterial speck disease. HopU1 quells host immunity through ADP-ribosylation of GRP7 as a substrate. HopU1 has been reported as the first ADP-ribosyltransferase virulence protein to be identified in a plant pathogen. Although several structures of ADP-ribosyltransferases have been determined to date, no structure of an ADP-ribosyltransferase from a plant pathogen has been determined. Here, the protein expression, purification, crystallization and preliminary crystallographic analysis of HopU1 are reported. Diffracting crystals were grown by hanging-drop vapour diffusion using polyethylene glycol 10,000 as a precipitant. Native and SAD data sets were collected using native and selenomethionine-derivative HopU1 crystals. The diffraction pattern of the crystal extended to 2.7 A resolution using synchrotron radiation. The crystals belonged to space group P4(3), with unit-cell parameters a=92.6, b=92.6, c=101.6 A.

摘要

多种动植物革兰氏阴性病原体以及一些与真核生物相关的细菌利用Ⅲ型蛋白分泌系统(T3SSs)将细菌毒力相关的“效应器”蛋白直接输送到宿主细胞中。HopU1是植物病原体丁香假单胞菌中的一种Ⅲ型效应蛋白,该病原体可引发植物细菌性斑点病。HopU1通过将GRP7作为底物进行ADP核糖基化来抑制宿主免疫。HopU1已被报道为在植物病原体中鉴定出的首个ADP核糖基转移酶毒力蛋白。尽管迄今为止已确定了几种ADP核糖基转移酶的结构,但尚未确定植物病原体中ADP核糖基转移酶的结构。在此,报道了HopU1的蛋白表达、纯化、结晶及初步晶体学分析。使用聚乙二醇10,000作为沉淀剂,通过悬滴气相扩散法生长出可产生衍射的晶体。使用天然型和硒代甲硫氨酸衍生型HopU1晶体收集了天然数据集和单波长反常散射(SAD)数据集。利用同步辐射,晶体的衍射图谱分辨率达到了2.7 Å。晶体属于P4(3)空间群,晶胞参数为a = 92.6、b = 92.6、c = 101.6 Å。

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1
Processing of X-ray diffraction data collected in oscillation mode.
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity.
Nature. 2007 May 17;447(7142):284-8. doi: 10.1038/nature05737. Epub 2007 Apr 22.
3
Protein delivery into eukaryotic cells by type III secretion machines.
Nature. 2006 Nov 30;444(7119):567-73. doi: 10.1038/nature05272.
4
Bacterial elicitation and evasion of plant innate immunity.
Nat Rev Mol Cell Biol. 2006 Aug;7(8):601-11. doi: 10.1038/nrm1984.
5
Type III secretion: the bacteria-eukaryotic cell express.
FEMS Microbiol Lett. 2005 Nov 1;252(1):1-10. doi: 10.1016/j.femsle.2005.08.036. Epub 2005 Sep 8.
6
The bacterial injection kit: type III secretion systems.
Ann Med. 2005;37(4):234-49. doi: 10.1080/07853890510037329.
7
Type III protein secretion mechanism in mammalian and plant pathogens.
Biochim Biophys Acta. 2004 Nov 11;1694(1-3):181-206. doi: 10.1016/j.bbamcr.2004.03.011.
9
Disabling surveillance: bacterial type III secretion system effectors that suppress innate immunity.
Cell Microbiol. 2004 Nov;6(11):1027-40. doi: 10.1111/j.1462-5822.2004.00452.x.

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