• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于生物标志物发现的稳定特征选择。

Stable feature selection for biomarker discovery.

机构信息

School of Software, Dalian University of Technology, China.

出版信息

Comput Biol Chem. 2010 Aug;34(4):215-25. doi: 10.1016/j.compbiolchem.2010.07.002. Epub 2010 Aug 10.

DOI:10.1016/j.compbiolchem.2010.07.002
PMID:20702140
Abstract

Feature selection techniques have been used as the workhorse in biomarker discovery applications for a long time. Surprisingly, the stability of feature selection with respect to sampling variations has long been under-considered. It is only until recently that this issue has received more and more attention. In this article, we review existing stable feature selection methods for biomarker discovery using a generic hierarchical framework. We have two objectives: (1) providing an overview on this new yet fast growing topic for a convenient reference; (2) categorizing existing methods under an expandable framework for future research and development.

摘要

特征选择技术长期以来一直被用作生物标志物发现应用中的主力军。令人惊讶的是,特征选择对采样变化的稳定性长期以来一直没有得到充分考虑。直到最近,这个问题才越来越受到关注。本文采用通用的分层框架,综述了用于生物标志物发现的现有稳定特征选择方法。我们有两个目标:(1)为方便参考,提供对这个新的、但发展迅速的主题的概述;(2)在可扩展的框架下对现有方法进行分类,以促进未来的研究和开发。

相似文献

1
Stable feature selection for biomarker discovery.用于生物标志物发现的稳定特征选择。
Comput Biol Chem. 2010 Aug;34(4):215-25. doi: 10.1016/j.compbiolchem.2010.07.002. Epub 2010 Aug 10.
2
Robust biomarker identification for cancer diagnosis with ensemble feature selection methods.基于集成特征选择方法的癌症诊断稳健生物标志物识别。
Bioinformatics. 2010 Feb 1;26(3):392-8. doi: 10.1093/bioinformatics/btp630. Epub 2009 Nov 25.
3
Computational biology for cardiovascular biomarker discovery.用于心血管生物标志物发现的计算生物学
Brief Bioinform. 2009 Jul;10(4):367-77. doi: 10.1093/bib/bbp008. Epub 2009 Mar 10.
4
A review of feature selection techniques in bioinformatics.生物信息学中特征选择技术综述。
Bioinformatics. 2007 Oct 1;23(19):2507-17. doi: 10.1093/bioinformatics/btm344. Epub 2007 Aug 24.
5
Development of biomarker classifiers from high-dimensional data.从高维数据中开发生物标志物分类器。
Brief Bioinform. 2009 Sep;10(5):537-46. doi: 10.1093/bib/bbp016. Epub 2009 Apr 3.
6
Supervised learning with decision tree-based methods in computational and systems biology.计算与系统生物学中基于决策树方法的监督学习
Mol Biosyst. 2009 Dec;5(12):1593-605. doi: 10.1039/b907946g. Epub 2009 Oct 5.
7
Alignment of LC-MS images, with applications to biomarker discovery and protein identification.液相色谱-质谱成像的比对及其在生物标志物发现和蛋白质鉴定中的应用。
Proteomics. 2008 Feb;8(4):650-72. doi: 10.1002/pmic.200700791.
8
Analytical strategies in lipidomics and applications in disease biomarker discovery.脂质组学中的分析策略及其在疾病生物标志物发现中的应用。
J Chromatogr B Analyt Technol Biomed Life Sci. 2009 Sep 15;877(26):2836-46. doi: 10.1016/j.jchromb.2009.01.038. Epub 2009 Feb 5.
9
Biomarker discovery by proteomics: challenges not only for the analytical chemist.蛋白质组学发现生物标志物:挑战不仅针对分析化学家。
Analyst. 2006 Nov;131(11):1193-6. doi: 10.1039/b607833h. Epub 2006 Sep 4.
10
Machine learning: an indispensable tool in bioinformatics.机器学习:生物信息学中不可或缺的工具。
Methods Mol Biol. 2010;593:25-48. doi: 10.1007/978-1-60327-194-3_2.

引用本文的文献

1
Graph feature selection for enhancing radiomic stability and reproducibility across multiple institutions in head and neck cancer.用于提高头颈癌多机构间影像组学稳定性和可重复性的图形特征选择
Sci Rep. 2025 Jul 31;15(1):27995. doi: 10.1038/s41598-025-12161-w.
2
Machine Learning Framework for Ovarian Cancer Diagnostics Using Plasma Lipidomics and Metabolomics.基于血浆脂质组学和代谢组学的卵巢癌诊断机器学习框架
Int J Mol Sci. 2025 Jul 10;26(14):6630. doi: 10.3390/ijms26146630.
3
The development and validation of a prediction model for post-AKI outcomes of pediatric inpatients.
儿童住院患者急性肾损伤后结局预测模型的开发与验证
Clin Kidney J. 2025 Jan 9;18(2):sfaf007. doi: 10.1093/ckj/sfaf007. eCollection 2025 Feb.
4
Multi-omic signatures of host response associated with presence, type, and outcome of enterococcal bacteremia.与肠球菌血症的存在、类型及转归相关的宿主反应的多组学特征。
mSystems. 2025 Feb 18;10(2):e0147124. doi: 10.1128/msystems.01471-24. Epub 2025 Jan 21.
5
Stable multivariate lesion symptom mapping.稳定的多变量病变症状映射
Apert Neuro. 2024;4. doi: 10.52294/001c.117311. Epub 2024 Jun 7.
6
Improving the performance and interpretability on medical datasets using graphical ensemble feature selection.使用图形集成特征选择提高医学数据集的性能和可解释性。
Bioinformatics. 2024 Jun 3;40(6). doi: 10.1093/bioinformatics/btae341.
7
SVM-DO: identification of tumor-discriminating mRNA signatures via support vector machines supported by Disease Ontology.SVM-DO:通过由疾病本体论支持的支持向量机识别肿瘤鉴别mRNA特征
Turk J Biol. 2023 Dec 14;47(6):349-365. doi: 10.55730/1300-0152.2670. eCollection 2023.
8
Text-mining-based feature selection for anticancer drug response prediction.基于文本挖掘的特征选择用于抗癌药物反应预测。
Bioinform Adv. 2024 Mar 26;4(1):vbae047. doi: 10.1093/bioadv/vbae047. eCollection 2024.
9
Filter and Wrapper Stacking Ensemble (FWSE): a robust approach for reliable biomarker discovery in high-dimensional omics data.过滤器和包装器堆叠集成 (FWSE):一种在高维组学数据中可靠发现生物标志物的稳健方法。
Brief Bioinform. 2023 Sep 22;24(6). doi: 10.1093/bib/bbad382.
10
miRDM-rfGA: Genetic algorithm-based identification of a miRNA set for detecting type 2 diabetes.miRDM-rfGA:基于遗传算法的 miRNA 集识别用于检测 2 型糖尿病。
BMC Med Genomics. 2023 Aug 22;16(1):195. doi: 10.1186/s12920-023-01636-2.