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一种用于细胞游离表达和纤维素酶活性筛选的集成微尺度平台。

A microscale platform for integrated cell-free expression and activity screening of cellulases.

机构信息

Joint BioEnergy Institute, Emeryville, CA 94608, USA.

出版信息

J Proteome Res. 2010 Nov 5;9(11):5677-83. doi: 10.1021/pr1003938. Epub 2010 Sep 20.

Abstract

Recent advances in production of cellulases by genetic engineering and isolation from natural microbial communities have necessitated the development of high-throughput analytical technologies for cellulase expression and screening. We have developed a novel cost-effective microscale approach based on in vitro protein synthesis, which seamlessly integrates cellulase expression with activity screening without the need for any protein purification procedures. Our platform achieves the entire process of transcription, translation, and activity screening within 2-3 hours in microwell arrays compared with days needed for conventional cell-based cellulase expression, purification, and activity screening. Highly sensitive fluorescence-based detection permits activity screening in volumes as low as 2-3 μL with minimal evaporation (even at temperatures as high as 95 °C) leading to two orders of magnitude reduction in reagent usage and cost. The platform was used for rapid expression and screening of β-glucosidases (BGs) and cellobiohydrolases (CBHs) isolated from thermophilic microorganisms. Furthermore, it was also used to determine optimum temperatures for BG and CBH activities and to study product inhibition of CBHs. The approach described here is well suited for first-pass screening of large libraries to identify cellulases with desired properties that can subsequently be produced on a large scale for detailed structural and functional characterization.

摘要

近年来,通过遗传工程生产纤维素酶和从天然微生物群落中分离纤维素酶的技术取得了进展,这就需要开发高通量的分析技术来进行纤维素酶的表达和筛选。我们开发了一种新颖的、具有成本效益的基于体外蛋白质合成的微尺度方法,该方法无需任何蛋白质纯化步骤,即可无缝集成纤维素酶的表达和活性筛选。与传统基于细胞的纤维素酶表达、纯化和活性筛选所需的数天相比,我们的平台可在微阵列中 2-3 小时内完成转录、翻译和活性筛选的整个过程。高灵敏度的荧光检测可在低至 2-3 μL 的体积下进行活性筛选,蒸发最小(即使在高达 95°C 的温度下),从而使试剂的使用量和成本降低两个数量级。该平台用于快速表达和筛选从嗜热微生物中分离得到的β-葡萄糖苷酶(BGs)和纤维二糖水解酶(CBHs)。此外,它还用于确定 BG 和 CBH 活性的最佳温度,并研究 CBHs 的产物抑制。这里描述的方法非常适合于对大型文库进行初次筛选,以鉴定具有所需特性的纤维素酶,然后可以大规模生产这些纤维素酶,以进行详细的结构和功能表征。

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