Microfluidics Research Group, Sandia National Laboratories, Livermore, CA, USA.
Electrophoresis. 2010 Aug;31(16):2804-12. doi: 10.1002/elps.201000176.
Rapid and specific characterization of bacterial endospores is dependent on the ability to rupture the cell wall to enable analysis of the intracellular components. In particular, bacterial spores from the bacillus genus are inherently robust and very difficult to lyze or solubilize. Standard protocols for spore inactivation include chemical treatment, sonication, pressure, and thermal lysis. Although these protocols are effective for the inactivation of these agents, they are less well suited for sample preparation for analysis using proteomic and genomic approaches. To overcome this difficulty, we have designed a simple capillary device to perform thermal lysis of bacterial spores. Using this device, we were able to super heat (195 degrees C) an ethylene glycol lysis buffer to perform rapid flow-through rupture and solubilization of bacterial endospores. We demonstrated that the lysates from this preparation method are compatible with CGE as well as DNA amplification analysis. We further demonstrated the flow-through lysing device could be directly coupled to a miniaturized electrophoresis instrument for integrated sample preparation and analysis. In this arrangement, we were enabled to perform sample lysis, fluorescent dye labeling, and protein electrophoresis analysis of bacterial spores in less than 10 min. The described sample preparation device is rapid, simple, inexpensive, and easily integratable with various microfluidic devices.
快速且特异性地鉴定细菌芽孢依赖于破坏细胞壁的能力,以分析细胞内成分。特别是芽孢杆菌属的细菌芽孢具有内在的坚固性,很难裂解或溶解。用于芽孢失活的标准方案包括化学处理、超声处理、压力和热裂解。虽然这些方案对于这些试剂的失活是有效的,但它们不太适合用于基于蛋白质组学和基因组学方法的分析的样品制备。为了克服这一困难,我们设计了一种简单的毛细管装置来进行细菌芽孢的热裂解。使用该装置,我们能够将乙二醇裂解缓冲液超加热(195°C),以实现细菌内孢子的快速流动破裂和溶解。我们证明了这种制备方法的裂解物与 CGE 以及 DNA 扩增分析兼容。我们进一步证明,该流动裂解装置可以直接与小型化电泳仪器耦合,用于集成样品制备和分析。在这种布置中,我们能够在不到 10 分钟内完成细菌孢子的样品裂解、荧光染料标记和蛋白质电泳分析。所描述的样品制备装置快速、简单、廉价,并且易于与各种微流控装置集成。