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巴西北部帕拉州镰状细胞贫血的分子特征。

Molecular characterization of sickle cell anemia in the Northern Brazilian state of Pará.

机构信息

Laboratory of Human and Medical Genetics, Institute for Biological Sciences, Federal University of Pará, Belém, Pará, Brazil.

出版信息

Am J Hum Biol. 2010 Sep-Oct;22(5):573-7. doi: 10.1002/ajhb.21047.

DOI:10.1002/ajhb.21047
PMID:20737602
Abstract

To assess alpha+-thalassemia deletion alleles, beta-thalassemia mutations and haplotypes linked to the HBBS cluster in a sample of 130 unrelated sickle cell anemia (SCA) patients (55% female) from Belém, Pará State, for their possible effects on the patients' survival. -alpha(3.7), -alpha(42), -alpha(20.5), and -(MED) alpha+-thalassemia deletion alleles were investigated using multiplex gap-PCR method. Characterization of beta-thalassemia mutations was made by direct genomic sequencing of the beta-globin gene amplified through polymerase chain reaction (PCR). Haplotypes were determined by analysis of six polymorphic restriction sites [(1) XmnI-5'gammaG, (2) HindIII-gammaG, (3) HindIII-gammaA, (4) HincII-psibeta, (5) HincII-3'psibeta, and (6) HinfI-5'beta] followed by restriction digestion and agarose gel electrophoresis. Twenty-one patients (16%) presented -alpha3.7 thalassemia. Sixteen of those (76%) were heterozygous (-alpha3.7/alphaalpha) and 5 (24%) were homozygous (-alpha3.7/-alpha3.7). -Alpha(4.2), -alpha(20.5) and -(MED) deletions were not found. Nine cases of sickle cell-beta thalassemia were found and four different beta-thal mutations were identified: beta(+) -88 (C>T), 3.8%; beta(+) codon 24 (T > A), 1.5%; beta(+) IVSI-110 (G > A), 0.7% and beta (IVSI-1 (G > A), 0.7%. No differences according to age were observed in -alpha(3.7) deletion, beta-thalassemia and HHBS haplotypes distribution. Our results suggest that although alpha- and beta-thalassemia and betaS haplotypes may have modulating effect on clinical expression and hematological parameters of SCA, these genetic variables probably have little influence on the subjects' survival.

摘要

为了评估 130 例无关联镰状细胞贫血(SCA)患者(55%为女性)样本中的 alpha+-珠蛋白生成障碍性贫血缺失等位基因、beta-地中海贫血突变和与 HBBS 簇相关的单倍型,以了解它们对患者生存的可能影响。使用多重间隙-PCR 方法检测 -alpha(3.7)、-alpha(42)、-alpha(20.5) 和 -(MED) alpha+-珠蛋白生成障碍性贫血缺失等位基因。通过聚合酶链反应(PCR)扩增的 beta-珠蛋白基因的直接基因组测序来确定 beta-地中海贫血突变的特征。通过分析六个多态性限制性位点 [(1) XmnI-5'gammaG,(2) HindIII-gammaG,(3) HindIII-gammaA,(4) HincII-psibeta,(5) HincII-3'psibeta 和 (6) HinfI-5'beta] 来确定单倍型,随后进行限制性消化和琼脂糖凝胶电泳。21 例患者(16%)存在 -alpha3.7 地中海贫血。其中 16 例(76%)为杂合子(-alpha3.7/alphaalpha),5 例(24%)为纯合子(-alpha3.7/-alpha3.7)。未发现 -alpha(4.2)、-alpha(20.5) 和 -(MED) 缺失。发现了 9 例镰状细胞-beta 地中海贫血病例,并鉴定出 4 种不同的 beta-地中海贫血突变:beta(+) -88(C>T),1.5%;beta(+) 密码子 24(T > A),0.7%;beta(+) IVSI-110(G > A),0.7%和 beta(IVSI-1(G > A),0.7%。-alpha(3.7)缺失、beta-地中海贫血和 HHBS 单倍型分布与年龄无关。我们的结果表明,尽管 alpha-和 beta-地中海贫血和 betaS 单倍型可能对 SCA 的临床表达和血液学参数具有调节作用,但这些遗传变量可能对受试者的生存影响不大。

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