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应用聚合酶链反应-序列特异性引物方法分析中国汉族人群 Diego 血型等位基因分布及 SLC4A1 基因 19 外显子 4 个新突变。

Distribution of Diego blood group alleles and identification of four novel mutations on exon 19 of SLC4A1 gene in the Chinese Han population by polymerase chain reaction sequence-based typing.

机构信息

Blood Center of Zhejiang Province, Hangzhou, Zhejiang, China.

出版信息

Vox Sang. 2011 Apr;100(3):317-21. doi: 10.1111/j.1423-0410.2010.01403.x. Epub 2010 Sep 2.

DOI:10.1111/j.1423-0410.2010.01403.x
PMID:20825599
Abstract

BACKGROUND

The Diego blood group system plays an important role in transfusion medicine. Genotyping of DI1 and DI2 alleles is helpful for the investigation into haemolytic disease of the newborn (HDN) and for the development of rare blood group databases. Here, we set up a polymerase chain reaction sequence-based typing (PCR-SBT) method for genotyping of Diego blood group alleles.

STUDY DESIGN AND METHODS

Specific primers for exon 19 of the solute carrier family 4, anion exchanger, member1 (SLC4A1) gene were designed, and our PCR-SBT method was established and optimized for Diego genotyping. A total of 1053 samples from the Chinese Han population and the family members of a rare proband with DI1/DI1 genotype were investigated by the PCR-SBT method. An allele-specific primer PCR (PCR-ASP) was used to verify the reliability of the PCR-SBT method.

RESULTS

The frequencies of DI1 and DI2 alleles in the Chinese Han population were 0.0247 and 0.9753, respectively. Six new single nucleotide polymorphisms (SNPs) were found in the sequenced regions of the SLC4A1 gene, and four novel SNPs located in the exon 19, in which one SNP could cause an amino acid alteration of Ala858Ser on erythrocyte anion exchanger protein 1. The genotypes for Diego blood group were identical among 41 selected samples with PCR-ASP and PCR-SBT.

CONCLUSION

The PCR-SBT method can be used in Diego genotyping as a substitute of serological technique when the antisera is lacking and was suitable for screening large numbers of donors in rare blood group databases.

摘要

背景

Diego 血型系统在输血医学中起着重要作用。DI1 和 DI2 等位基因的基因分型有助于新生儿溶血病(HDN)的研究和稀有血型数据库的开发。本文建立了一种基于聚合酶链反应序列的 Diego 血型基因分型方法(PCR-SBT)。

研究设计与方法

设计了溶质载体家族 4、阴离子交换器成员 1(SLC4A1)基因外显子 19 的特异性引物,并对 Diego 基因分型的 PCR-SBT 方法进行了建立和优化。采用 PCR-SBT 方法对 1053 例中国汉族人群和 1 例 DI1/DI1 基因型罕见先证者家系成员进行检测,并用等位基因特异性引物 PCR(PCR-ASP)验证了 PCR-SBT 方法的可靠性。

结果

中国汉族人群 DI1 和 DI2 等位基因的频率分别为 0.0247 和 0.9753。在 SLC4A1 基因测序区域发现了 6 个新的单核苷酸多态性(SNP),其中 4 个新的 SNP 位于外显子 19,其中一个 SNP 可导致红细胞阴离子交换蛋白 1 的 Ala858Ser 氨基酸改变。在 41 例经 PCR-ASP 和 PCR-SBT 检测的样本中,Diego 血型基因型完全一致。

结论

当缺乏抗血清时,PCR-SBT 方法可替代血清学技术用于 Diego 基因分型,适合稀有血型数据库中大量供者的筛选。

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Vox Sang. 2011 Apr;100(3):317-21. doi: 10.1111/j.1423-0410.2010.01403.x. Epub 2010 Sep 2.
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