Institute of Applied Biochemistry and Graduate School of Life and Environmental Sciences, The University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan.
J Biol Chem. 2010 Nov 5;285(45):34793-802. doi: 10.1074/jbc.M110.150227. Epub 2010 Sep 7.
We previously discovered N-substituted formamide deformylase (NfdA) in Arthrobacter pascens F164, which degrades N-substituted formamide (Fukatsu, H., Hashimoto, Y., Goda, M., Higashibata, H., and Kobayashi, M. (2004) Proc. Natl. Acad. Sci. U.S.A. 101, 13726-13731). In this study, we found an enzyme involved in the first step of isonitrile metabolism, isonitrile hydratase, that hydrates isonitrile to the corresponding N-substituted formamide. First, we investigated the optimum culture conditions for the production of isonitrile hydratase. The highest enzyme activity was obtained when A. pascens F164 was cultured in a nutrient medium containing N-benzylformamide. This Arthrobacter isonitrile hydratase was purified, characterized, and compared with Pseudomonas putida N19-2 isonitrile hydratase (InhA), which is the sole one reported at present. Arthrobacter isonitrile hydratase was found to have a molecular mass of about 530 kDa and to consist of 12 identical subunits. The apparent K(m) value for cyclohexyl isocyanide was 0.95 ± 0.05 mm. A. pascens F164 grew and exhibited the isonitrile hydratase and N-substituted formamide deformylase activities when cultured in a medium containing an isonitrile as the sole carbon and nitrogen sources. However, both enzyme activities were not observed on culture in a medium containing glycerol and (NH(4))(2)SO(4) as the sole carbon and nitrogen sources, respectively. These findings suggested that the Arthrobacter enzyme is an inducible enzyme, possibly involved in assimilation and/or detoxification of isonitrile. Moreover, gene cloning of the Arthrobacter enzyme revealed no sequence similarity between this enzyme and InhA. Comparison of their properties and features demonstrated that the two enzymes are biochemically, immunologically, and structurally different from each other. Thus, we discovered a new isonitrile hydratase named InhB.
我们之前在节杆菌属(Arthrobacter) F164 中发现了 N-取代甲酰胺脱甲酰酶(NfdA),它可降解 N-取代甲酰胺(Fukatsu,H.,Hashimoto,Y.,Goda,M.,Higashibata,H.和 Kobayashi,M.(2004)Proc。Natl。科学院。美国。101,13726-13731)。在这项研究中,我们发现了一种参与异腈代谢第一步的酶,即异腈水解酶,它将异腈水合为相应的 N-取代甲酰胺。首先,我们研究了生产异腈水解酶的最佳培养条件。当节杆菌属 F164 在含有 N-苄基甲酰胺的营养培养基中培养时,获得了最高的酶活性。这种节杆菌属异腈水解酶已被纯化、表征,并与目前唯一报道的假单胞菌属 N19-2 异腈水解酶(InhA)进行了比较。发现节杆菌属异腈水解酶的分子量约为 530 kDa,由 12 个相同的亚基组成。环己基异氰化物的表观 K(m)值为 0.95±0.05mm。当在含有异腈作为唯一碳源和氮源的培养基中培养时,节杆菌属 F164 生长并表现出异腈水解酶和 N-取代甲酰胺脱甲酰酶活性。然而,当在含有甘油和(NH(4))(2)SO(4)作为唯一碳源和氮源的培养基中培养时,都没有观察到这两种酶的活性。这些发现表明,节杆菌属酶是一种诱导酶,可能参与异腈的同化和/或解毒。此外,节杆菌属酶的基因克隆表明,该酶与 InhA 之间没有序列相似性。对它们的性质和特征的比较表明,这两种酶在生化、免疫和结构上彼此不同。因此,我们发现了一种新的异腈水解酶,命名为 InhB。