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The sea urchin sns5 insulator protects retroviral vectors from chromosomal position effects by maintaining active chromatin structure.海胆sns5绝缘子通过维持活跃的染色质结构来保护逆转录病毒载体免受染色体位置效应的影响。
Mol Ther. 2009 Aug;17(8):1434-41. doi: 10.1038/mt.2009.74. Epub 2009 Apr 7.
2
The cHS4 chromatin insulator reduces gammaretroviral vector silencing by epigenetic modifications of integrated provirus.cHS4染色质绝缘子通过整合前病毒的表观遗传修饰减少γ逆转录病毒载体沉默。
Gene Ther. 2008 Jan;15(1):49-53. doi: 10.1038/sj.gt.3303009. Epub 2007 Nov 8.
3
We gather together: insulators and genome organization.我们齐聚一堂:绝缘子与基因组组织。
Curr Opin Genet Dev. 2007 Oct;17(5):400-7. doi: 10.1016/j.gde.2007.08.005. Epub 2007 Oct 24.
4
Improved human beta-globin expression from self-inactivating lentiviral vectors carrying the chicken hypersensitive site-4 (cHS4) insulator element.携带鸡高敏位点4(cHS4)绝缘子元件的自失活慢病毒载体提高了人β-珠蛋白的表达。
Mol Ther. 2007 Oct;15(10):1863-71. doi: 10.1038/sj.mt.6300259. Epub 2007 Jul 10.
5
Functional analysis of various promoters in lentiviral vectors at different stages of in vitro differentiation of mouse embryonic stem cells.小鼠胚胎干细胞体外分化不同阶段慢病毒载体中各种启动子的功能分析。
Mol Ther. 2007 Sep;15(9):1630-9. doi: 10.1038/sj.mt.6300251. Epub 2007 Jul 3.
6
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.ENCODE试点项目对人类基因组1%的功能元件进行鉴定与分析。
Nature. 2007 Jun 14;447(7146):799-816. doi: 10.1038/nature05874.
7
Lentiviral vectors containing an enhancer-less ubiquitously acting chromatin opening element (UCOE) provide highly reproducible and stable transgene expression in hematopoietic cells.含有无增强子的普遍作用染色质开放元件(UCOE)的慢病毒载体在造血细胞中提供高度可重复且稳定的转基因表达。
Blood. 2007 Sep 1;110(5):1448-57. doi: 10.1182/blood-2006-12-060814. Epub 2007 Apr 24.
8
Extended core sequences from the cHS4 insulator are necessary for protecting retroviral vectors from silencing position effects.来自cHS4绝缘子的延伸核心序列对于保护逆转录病毒载体免受沉默位置效应的影响是必要的。
Hum Gene Ther. 2007 Apr;18(4):333-43. doi: 10.1089/hum.2007.021.
9
Selection of target sites for mobile DNA integration in the human genome.人类基因组中移动DNA整合靶位点的选择
PLoS Comput Biol. 2006 Nov 24;2(11):e157. doi: 10.1371/journal.pcbi.0020157.
10
Close sequence comparisons are sufficient to identify human cis-regulatory elements.紧密的序列比较足以识别人类顺式调控元件。
Genome Res. 2006 Jul;16(7):855-63. doi: 10.1101/gr.4717506. Epub 2006 Jun 12.

一种用于提高逆转录病毒载体基因表达的调控元件的功能筛选。

A functional screen for regulatory elements that improve retroviral vector gene expression.

机构信息

Department of Medicine, Division of Medical Genetics, University of Washington, Seattle, WA, USA.

出版信息

Blood Cells Mol Dis. 2010 Dec 15;45(4):343-50. doi: 10.1016/j.bcmd.2010.08.005. Epub 2010 Sep 16.

DOI:10.1016/j.bcmd.2010.08.005
PMID:20846887
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2993826/
Abstract

Recombinant retroviruses constitute the most common class of gene delivery vectors used in hematopoietic cell-based gene therapy. However, the use of these vectors can be limited by inadequate levels of transgene expression, often mediated by expression variegation and vector silencing due to chromosomal position effects. Toward the goal of addressing this problem, we sought to identify cis-regulatory elements from the human genome that can improve the level and stability of retroviral vector gene expression. Libraries of size-selected fragments from the human genome were cloned into the "double-copy" position of the gammaretroviral reporter vector MGPN2, and the resulting vectors underwent several rounds of transduction and selection for high-level vector GFP expression. From this screen we identified both enhancer-like elements and vector mutations associated with increased vector expression. One element, H-11, exhibited enhancer activity in a mouse bone marrow progenitor colony assay, a human promoter trap assay, and a long-term mouse bone marrow transplant assay. This element seems to be an orientation-dependent, tissue-independent enhancer.

摘要

重组逆转录病毒构成了用于基于造血细胞的基因治疗的最常见的基因传递载体类别。然而,由于染色体位置效应引起的转基因表达的不均一性和载体沉默,这些载体的使用可能会受到限制。为了实现这一目标,我们试图从人类基因组中寻找顺式调控元件,以提高逆转录病毒载体基因表达的水平和稳定性。从人类基因组中大小选择片段的文库被克隆到γ逆转录病毒报告载体 MGPN2 的“双拷贝”位置,并且所得载体经历了几轮转导和选择,以获得高水平的载体 GFP 表达。从该筛选中,我们鉴定了与增加载体表达相关的增强子样元件和载体突变。一个元件 H-11 在小鼠骨髓祖细胞集落测定、人启动子陷阱测定和长期小鼠骨髓移植测定中表现出增强子活性。该元件似乎是一种依赖于取向的、组织独立的增强子。