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短期缺氧应激引起的秀丽隐杆线虫的蛋白质组学研究。

A proteomic view of Caenorhabditis elegans caused by short-term hypoxic stress.

机构信息

Life Science College of Nanjing Agriculture University, Nanjing 210095, China.

Beijing Institute of Radiation Medicine, State Key Laboratory of Proteomics, Beijing 100850, China.

出版信息

Proteome Sci. 2010 Sep 21;8:49. doi: 10.1186/1477-5956-8-49.

Abstract

BACKGROUND

The nematode Caenorhabditis elegans is both sensitive and tolerant to hypoxic stress, particularly when the evolutionarily conserved hypoxia response pathway HIF-1/EGL-9/VHL is involved. Hypoxia-induced changes in the expression of a number of genes have been analyzed using whole genome microarrays in C. elegans, but the changes at the protein level in response to hypoxic stress still remain unclear.

RESULTS

Here, we utilized a quantitative proteomic approach to evaluate changes in the expression patterns of proteins during the early response to hypoxia in C. elegans. Two-dimensional difference gel electrophoresis (2D-DIGE) was used to compare the proteomic maps of wild type C. elegans strain N2 under a 4-h hypoxia treatment (0.2% oxygen) and under normoxia (control). A subsequent analysis by MALDI-TOF-TOF-MS revealed nineteen protein spots that were differentially expressed. Nine of the protein spots were significantly upregulated, and ten were downregulated upon hypoxic stress. Three of the upregulated proteins were involved in cytoskeletal function (LEV-11, MLC-1, ACT-4), while another three upregulated (ATP-2, ATP-5, VHA-8) were ATP synthases functionally related to energy metabolism. Four ribosomal proteins (RPL-7, RPL-8, RPL-21, RPS-8) were downregulated, indicating a decrease in the level of protein translation upon hypoxic stress. The overexpression of tropomyosin (LEV-11) was further validated by Western blot. In addition, the mutant strain of lev-11(x12) also showed a hypoxia-sensitive phenotype in subsequent analyses, confirming the proteomic findings.

CONCLUSIONS

Taken together, our data suggest that altered protein expression, structural protein remodeling, and the reduction of translation might play important roles in the early response to oxygen deprivation in C. elegans, and this information will help broaden our knowledge on the mechanism of hypoxia response.

摘要

背景

秀丽隐杆线虫对低氧胁迫既敏感又耐受,尤其是当涉及到进化上保守的低氧反应途径 HIF-1/EGL-9/VHL 时。利用全基因组微阵列分析了线虫在低氧诱导下许多基因的表达变化,但对低氧胁迫下蛋白质水平的变化仍不清楚。

结果

在这里,我们利用定量蛋白质组学方法来评估秀丽隐杆线虫早期对低氧反应中蛋白质表达模式的变化。二维差异凝胶电泳(2D-DIGE)用于比较野生型秀丽隐杆线虫 N2 菌株在 4 小时低氧处理(0.2%氧气)和常氧(对照)下的蛋白质组图谱。随后通过 MALDI-TOF-TOF-MS 分析,发现 19 个蛋白斑点差异表达。低氧应激下 9 个蛋白斑点显著上调,10 个蛋白斑点下调。上调的 3 个蛋白与细胞骨架功能有关(LEV-11、MLC-1、ACT-4),另外 3 个上调的蛋白(ATP-2、ATP-5、VHA-8)与能量代谢相关的 ATP 合酶有关。4 个核糖体蛋白(RPL-7、RPL-8、RPL-21、RPS-8)下调,表明低氧应激时蛋白质翻译水平降低。肌球蛋白(LEV-11)的过表达进一步通过 Western blot 验证。此外,后续分析还显示,lev-11(x12)突变体对线虫的低氧敏感表型,证实了蛋白质组学的发现。

结论

综上所述,我们的数据表明,蛋白质表达的改变、结构蛋白重塑以及翻译的减少可能在秀丽隐杆线虫对缺氧的早期反应中发挥重要作用,这将有助于我们拓宽对缺氧反应机制的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdc5/2954870/2427f80ac4da/1477-5956-8-49-1.jpg

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