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改良的一维凝胶电泳图像分析系统。

An improved 1-D gel electrophoresis image analysis system.

机构信息

Department of Electrical Engineering, School of Engineering and Mines, University of North Dakota, Grand Forks, ND 58202-7165, USA.

出版信息

Adv Exp Med Biol. 2010;680:609-17. doi: 10.1007/978-1-4419-5913-3_67.

Abstract

Images obtained through the gel electrophoresis technique contain important genetic information. However, due to degradations and abnormalities from which these images suffer, extracting this information can be a tedious task and may lead to reproducibility issues. Image processing techniques that are commonly used to analyze gel electrophoresis images require three main steps: band detection, band matching, and quantification. Although several techniques were proposed to automate all steps fully, gel image analysis still requires researchers to extract information manually. This type of extraction is time consuming and subject to human errors. This paper proposes a fully automated system to analyze the gel electrophoresis images. This system involves four main steps: lane separation, lane segmentation, band detection, and data quantification.

摘要

凝胶电泳技术获得的图像包含重要的遗传信息。然而,由于这些图像受到降解和异常的影响,提取这些信息可能是一项繁琐的任务,并可能导致可重复性问题。常用于分析凝胶电泳图像的图像处理技术需要三个主要步骤:条带检测、条带匹配和定量。尽管已经提出了几种技术来完全自动化所有步骤,但凝胶图像分析仍然需要研究人员手动提取信息。这种提取方式既耗时又容易出错。本文提出了一种全自动的凝胶电泳图像分析系统。该系统包括四个主要步骤:泳道分离、泳道分割、条带检测和数据定量。

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