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DNA过度拉伸中的不同拉伸模式:理论分析

Different pulling modes in DNA overstretching: a theoretical analysis.

作者信息

Marenduzzo D, Orlandini E, Seno F, Trovato A

机构信息

SUPA, School of Physics, University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ, Scotland.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 May;81(5 Pt 1):051926. doi: 10.1103/PhysRevE.81.051926. Epub 2010 May 27.

Abstract

We study the thermally driven denaturation of a double-stranded polymer in the presence of a stretching force via Monte-Carlo simulations. When one strand only is stretched, the denaturation transition is first order, while when both strands are stretched, melting is second order. By revisiting the Poland-Scheraga model for DNA melting, we show that at room temperature, the most likely scenario is that DNA melts as it overstretches. Our results are in general agreement with the most recent experiments and suggest how varying temperature and stretching mode may help settle the question whether S-DNA exists or not.

摘要

我们通过蒙特卡罗模拟研究了在存在拉伸力的情况下双链聚合物的热驱动变性。当仅一条链被拉伸时,变性转变是一级的,而当两条链都被拉伸时,解链是二级的。通过重新审视DNA解链的波兰-谢拉加模型,我们表明在室温下,最可能的情况是DNA在过度拉伸时解链。我们的结果与最新实验总体一致,并表明改变温度和拉伸模式可能有助于解决是否存在S-DNA的问题。

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