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腺病毒 L4-22K 蛋白的自缔合。

Self-association of the adenoviral L4-22K protein.

机构信息

Department of Pharmaceutical Sciences, School of Pharmacy, University of Colorado Denver, C238-P15, 12700 East 19th Avenue, Aurora, Colorado 80045, United States.

出版信息

Biochemistry. 2010 Nov 16;49(45):9830-8. doi: 10.1021/bi101144q. Epub 2010 Oct 19.

Abstract

Human adenovirus (Ad) is an icosahedral, double-stranded DNA virus that causes infections of the respiratory tract, urinary tract, and gastrointestinal tract. Assembly of virus particles requires condensation and encapsidation of the linear viral genome. This process requires sequence specific binding of two viral proteins, called IVa2 and L4-22K, to a conserved sequence located at the left end of the viral genome, called the packaging sequence (PS). IVa2 and an alternatively spliced form of L4-22K, called L4-33K, also function as transcriptional activators of the major late promoter (MLP), which encodes viral structural and core proteins. IVa2 and L4-33K bind to identical conserved DNA sequences downstream of the MLP, called the downstream element (DE), to activate transcription. To begin to dissect how the IVa2, L4-22K, and L4-33K proteins simultaneously function as transcriptional activators and DNA packaging proteins, we need to understand the thermodynamics of assembly of these proteins on DNA that contains the PS as well as the DE. Toward this end, we have characterized the self-assembly properties of highly purified, recombinant L4-22K protein. We show that L4-22K reversibly assembles into higher-order structures according to an indefinite, isodesmic assembly scheme. We show that the smallest polymerizing unit is likely the L4-22K monomer (s(20,w) = 2.16 ± 0.04 S) and that the monomer assembles with itself and/or other aggregates with an equilibrium association constant, L, of 112 (102, 124) μM(-1) (0.1 M NaCl, pH 7, 25 °C). A mechanistic consequence of an isodesmic, indefinite assembly process is that the free concentration of the smallest polymerizing unit cannot exceed 1/L. We discuss the implications of this observation with respect to the thermodynamics of assembly of L4-22K and IVa2 on the PS.

摘要

人腺病毒(Ad)是一种二十面体、双链 DNA 病毒,可引起呼吸道、泌尿道和胃肠道感染。病毒粒子的组装需要线性病毒基因组的浓缩和包裹。这个过程需要两种病毒蛋白,称为 IVa2 和 L4-22K,与位于病毒基因组左端的保守序列,即包装序列(PS)特异性结合。IVa2 和 L4-22K 的一种替代剪接形式,称为 L4-33K,也作为主要晚期启动子(MLP)的转录激活因子发挥作用,该启动子编码病毒结构和核心蛋白。IVa2 和 L4-33K 与 MLP 下游的相同保守 DNA 序列,称为下游元件(DE)结合,以激活转录。为了开始剖析 IVa2、L4-22K 和 L4-33K 蛋白如何同时作为转录激活因子和 DNA 包装蛋白发挥作用,我们需要了解包含 PS 和 DE 的 DNA 上这些蛋白组装的热力学。为此,我们已经对高度纯化的重组 L4-22K 蛋白的自组装特性进行了表征。我们表明,L4-22K 可根据不确定的等摩尔组装方案可逆地组装成高级结构。我们表明,最小的聚合单元可能是 L4-22K 单体(s(20,w) = 2.16 ± 0.04 S),并且单体与其自身和/或其他聚集体组装具有平衡缔合常数 L,为 112(102,124)μM(-1)(0.1 M NaCl,pH 7,25°C)。等摩尔、不确定组装过程的一个机械后果是,最小聚合单元的游离浓度不能超过 1/L。我们讨论了这一观察结果对 L4-22K 和 IVa2 在 PS 上组装的热力学的影响。

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