Suppr超能文献

[巴西橡胶树甲基化过滤文库的构建。]

[Construction of a methylation filtration library in Hevea brasiliensis.].

作者信息

Huang Guan-Qing, Hua Yu-Wei, Gao Zhan, Huang Hua-Sun

机构信息

Rubber Research Institute of Chinese Academy of Tropical Agricultural Sciences, Danzhou, China.

出版信息

Yi Chuan. 2010 Oct;32(10):1071-6. doi: 10.3724/sp.j.1005.2010.01071.

Abstract

In order to enrich gene encoding region of Hevea brasiliensis, a methylation filtration library was constructed using Escherichia coli McrBC restriction-modification system. The titers of the non-amplified library and the amplified library were 2.6×106 pfu/ml and 9.0×109, respectively. The rate of positive clones was 86.4%. The lengths of inserted DNA sequence ranged from 1 kb to 2.5 kb and the average size of inserts was 1.2 kb. One hundred clones were selected randomly for sequencing, resulting in splicing out of 81 non-redundant sequences, including 6 contigs and 75 singlets. The redundancy was 17.35%. Blast analysis showed that 39.5% of non-redundant sequences were homologous with the Nr database, 14.81% with the EST database, and 32.1% were unknown sequences. Some sequences were related genes for flowering, insect and disease resistance. Therefore, the rubber tree methylation library is helpful for discovery and cloning of functional genes.

摘要

为了丰富巴西橡胶树的基因编码区,利用大肠杆菌McrBC限制修饰系统构建了甲基化过滤文库。未扩增文库和扩增文库的滴度分别为2.6×106 pfu/ml和9.0×109。阳性克隆率为86.4%。插入DNA序列的长度范围为1 kb至2.5 kb,插入片段的平均大小为1.2 kb。随机选择100个克隆进行测序,拼接出81个非冗余序列,包括6个重叠群和75个单拷贝序列。冗余度为17.35%。Blast分析表明,39.5%的非冗余序列与Nr数据库同源,14.81%与EST数据库同源,32.1%为未知序列。一些序列是与开花、抗虫和抗病相关的基因。因此,橡胶树甲基化文库有助于功能基因的发现和克隆。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验