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钴取代粪产碱杆菌假细胞色素 c 的晶体结构。

The crystal structure of cobalt-substituted pseudoazurin from Alcaligenes faecalis.

机构信息

I.M.B.B.-FO.R.T.H., N. Plastira 100, Heraklion 70013, Greece.

出版信息

Biopolymers. 2011 Mar;95(3):202-7. doi: 10.1002/bip.21553.

Abstract

The Cu(II) center at the active site of the blue copper protein pseudoazurin from Alcaligenes faecalis has been substituted by Co(II) via denaturing of the protein, chelation and removal of copper by EDTA and refolding of the apo-protein, followed by addition of an aqueous solution of CoCl(2). Sitting drop vapour diffusion experiments produced green hexagonal crystals, which belong to space group P6(5), with unit cell dimensions a = b = 50.03, c = 98.80 Å. Diffraction data, collected at 291 K on a copper rotating anode X-ray source, were phased by the anomalous signal of the cobalt atom. The structure was built automatically, fitted manually and subsequently refined to 1.86 Å resolution. The Co-substituted protein exhibits similar overall geometry to the native structure with copper. Cobalt binds more strongly to the axial Met86-Sδ and retains the tetrahedral arrangement with the four ligand atoms, His40-Nδ(1), Cys78-Sγ, His81-Nδ(1), and 86Met-Sδ, although the structure is less distorted than the native copper protein. The structure reported herein, is the first crystallographic structure of a Co(II)-substituted pseudoazurin.

摘要

来自粪产碱杆菌的蓝色铜蛋白假血蓝蛋白活性位点的 Cu(II)中心通过蛋白质变性、螯合和 EDTA 去除铜以及脱辅基蛋白的重折叠,然后加入 CoCl(2)的水溶液被 Co(II)取代。采用悬滴蒸汽扩散实验产生了绿色六方晶体,属于 P6(5)空间群,具有单元晶胞参数 a = b = 50.03,c = 98.80 Å。在铜旋转阳极 X 射线源上于 291 K 收集衍射数据,通过钴原子的反常信号进行相位确定。结构自动构建,手动拟合,随后精修至 1.86 Å 分辨率。与含铜的天然结构相比,钴取代的蛋白质表现出相似的整体几何形状。钴与轴向 Met86-Sδ 结合更牢固,并保留四面体排列,四个配体原子为 His40-Nδ(1)、Cys78-Sγ、His81-Nδ(1)和 86Met-Sδ,尽管结构的扭曲程度小于天然铜蛋白。本文报道的结构是第一个 Co(II)取代假血蓝蛋白的晶体结构。

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