A large-scale protein-function database.
作者信息
Apweiler Rolf, Armstrong Richard, Bairoch Amos, Cornish-Bowden Athel, Halling Peter J, Hofmeyr Jan-Hendrik S, Kettner Carsten, Leyh Thomas S, Rohwer Johann, Schomburg Dietmar, Steinbeck Christoph, Tipton Keith
出版信息
Nat Chem Biol. 2010 Nov;6(11):785. doi: 10.1038/nchembio.460.
Abstract
摘要
相似文献
1
A large-scale protein-function database.
Nat Chem Biol. 2010 Nov;6(11):785. doi: 10.1038/nchembio.460.
2
Review of the BRENDA Database.
Metab Eng. 2003 Apr;5(2):71-3. doi: 10.1016/s1096-7176(03)00008-9.
3
ADME-AP: a database of ADME associated proteins.
Bioinformatics. 2002 Dec;18(12):1699-700. doi: 10.1093/bioinformatics/18.12.1699.
4
Novel biocatalysis by database mining.
Curr Opin Biotechnol. 2004 Aug;15(4):280-4. doi: 10.1016/j.copbio.2004.05.003.
5
PDBSprotEC: a Web-accessible database linking PDB chains to EC numbers via SwissProt.
Bioinformatics. 2004 Apr 12;20(6):986-8. doi: 10.1093/bioinformatics/bth048. Epub 2004 Feb 5.
6
PLPMDB: pyridoxal-5'-phosphate dependent enzymes mutants database.
Bioinformatics. 2004 Dec 12;20(18):3652-3. doi: 10.1093/bioinformatics/bth399. Epub 2004 Jul 9.
7
Protein databases on the internet.
Curr Protoc Mol Biol. 2004 Nov;Chapter 19:Unit 19.4. doi: 10.1002/0471142727.mb1904s68.
8
Using the Structure-function Linkage Database to characterize functional domains in enzymes.
Curr Protoc Bioinformatics. 2006 Mar;Chapter 2:Unit 2.10. doi: 10.1002/0471250953.bi0210s13.
9
The fiction of function.
Bioinformatics. 2003 Oct 12;19(15):1934-6. doi: 10.1093/bioinformatics/btg277.
10
ProTherm, Thermodynamic Database for Proteins and Mutants: developments in version 3.0.
Nucleic Acids Res. 2002 Jan 1;30(1):301-2. doi: 10.1093/nar/30.1.301.
引用本文的文献
1
Activity assays for flavoprotein oxidases: an overview.
Appl Microbiol Biotechnol. 2025 May 8;109(1):115. doi: 10.1007/s00253-025-13494-2.
2
An empirical analysis of enzyme function reporting for experimental reproducibility: Missing/incomplete information in published papers.
Biophys Chem. 2018 Nov;242:22-27. doi: 10.1016/j.bpc.2018.08.004. Epub 2018 Aug 24.
3
Characterising Complex Enzyme Reaction Data.
PLoS One. 2016 Feb 3;11(2):e0147952. doi: 10.1371/journal.pone.0147952. eCollection 2016.
4
Analysis of Human RSV Immunity at the Molecular Level: Learning from the Past and Present.
PLoS One. 2015 May 22;10(5):e0127108. doi: 10.1371/journal.pone.0127108. eCollection 2015.
5
Single nucleotide variations: biological impact and theoretical interpretation.
Protein Sci. 2014 Dec;23(12):1650-66. doi: 10.1002/pro.2552. Epub 2014 Oct 20.
6
Integrating in silico resources to map a signaling network.
Methods Mol Biol. 2014;1101:197-245. doi: 10.1007/978-1-62703-721-1_11.
7
The representation of protein complexes in the Protein Ontology (PRO).
BMC Bioinformatics. 2011 Sep 19;12:371. doi: 10.1186/1471-2105-12-371.
8
Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop.
Stand Genomic Sci. 2010 Dec 25;3(3):259-66. doi: 10.4056/sigs.147362.
本文引用的文献
1
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project.
Nat Biotechnol. 2008 Aug;26(8):889-96. doi: 10.1038/nbt.1411.
2
New initiatives pertaining to biochemistry in 2008.
Biochemistry. 2008 Jan 8;47(1):1-2. doi: 10.1021/bi702420f.
3
The importance of uniformity in reporting protein-function data.
Trends Biochem Sci. 2005 Jan;30(1):11-2. doi: 10.1016/j.tibs.2004.11.002.
Zotero 插件