Department of Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, British Columbia, Canada.
J Eukaryot Microbiol. 2010 Nov-Dec;57(6):529-53. doi: 10.1111/j.1550-7408.2010.00508.x. Epub 2010 Oct 7.
Five new species of Loma were described from five Pacific fishes using light-microscopic and ultrastructural features along with phylogenetic analysis of the gene sequences of ribosomal RNA (rRNA) and elongation factor 1-alpha. Morphological data revealed both qualitative and quantitative differences in developmental stages and timing, vesicles, xenoma features, and spore sizes with statistical support that differentiated Loma pacificodae n. sp. in Pacific cod, Loma wallae n. sp. in walleye pollock, Loma kenti n. sp. in Pacific tomcod, Loma lingcodae n. sp. in lingcod, and Loma richardi n. sp. in sablefish from each other and other species in the genus. Phylogenetic analyses combined with monophyly tests supported species designations, but with low resolution in two cases perhaps due to rRNA paralogs or recent speciation. Loma branchialis in haddock was shown to be separate from Loma morhua in Atlantic cod, thereby making L. morhua, and not L. branchialis, the type species. A species from brook trout was shown to be a separate species from Loma salmonae, not a variant strain selected in the laboratory. By comparison with gadid host phylogeny, these Loma species appear to have coevolved with their hosts, first colonizing the Pacific basin about 12 million years ago.
使用核糖体 RNA(rRNA)和延伸因子 1-α基因序列的系统发育分析,从五种太平洋鱼类中描述了五个新种的 Loma。形态学数据显示,在发育阶段和时间、小泡、异生体特征和孢子大小方面存在定性和定量差异,具有统计学支持,可将太平洋鳕鱼中的新种 Loma pacificodae n. sp.、大眼狮鲈中的新种 Loma wallae n. sp.、太平洋无须鳕中的新种 Loma kenti n. sp.、牙鳕中的新种 Loma lingcodae n. sp. 和美洲黑石斑鱼中的新种 Loma richardi n. sp. 彼此以及该属的其他种区分开来。系统发育分析结合单系检验支持种的命名,但在两种情况下分辨率较低,可能是由于 rRNA 旁系同源物或最近的物种形成。黑线鳕中的 Loma branchialis 与大西洋鳕鱼中的 Loma morhua 分开,从而使 L. morhua 而不是 L. branchialis 成为模式种。一种来自溪红点鲑的种被证明与鲑形目鲑科的鲑形目鲑科不同,而不是在实验室中选择的变异株。与 gadid 宿主系统发育相比,这些 Loma 物种似乎与其宿主共同进化,大约在 1200 万年前首次在太平洋盆地中殖民。