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stolbur 植原体抗原膜蛋白基因标记受到多样化正选择。

The stolbur phytoplasma antigenic membrane protein gene stamp is submitted to diversifying positive selection.

机构信息

UMR Génomique Diversité Pouvoir Pathogène, INRA, Villenave d'Ornon, France.

出版信息

Gene. 2011 Feb 1;472(1-2):37-41. doi: 10.1016/j.gene.2010.10.012. Epub 2010 Oct 31.

Abstract

Surface proteins play an important role in phytoplasma life cycle. The antigenic membrane protein (AMP) of 'Candidatus Phytoplasma asteris' has been shown to interact with the insect microfilaments. Due to the synteny of the groL-amp-nadE genetic locus between phytoplasma genomes, the gene stamp that encodes the antigenic membrane protein of stolbur phytoplasma has been cloned and characterized. It encodes a 157 amino acid-long protein with a predicted signal peptide and a C-terminal hydrophobic alpha-helix. STAMP was 26-40% identical to AMP of 'Candidatus Phytoplasma asteris' strains and 40% identical to AMP of 'Ca. P. japonicum'. The expression of STAMP in Escherichia. coli produced a 16 kDa peptide recognized by an anti-stolbur monoclonal antibody. Stamp was more variable than the house-keeping gene secY and the ratio between non-synonymous over synonymous mutations (dN/dS ) was 2.78 for stamp as compared to 0.64 for secY. This indicates that stamp is submitted to a positive diversifying selection pressure.

摘要

表面蛋白在植原体生活史中起着重要作用。已证实“植原体 asteris”的抗原膜蛋白(AMP)与昆虫微丝相互作用。由于植原体基因组中 groL-amp-nadE 基因座的同线性,已克隆并表征了编码茎点黄斑植原体抗原膜蛋白的基因印记。它编码一个 157 个氨基酸长的蛋白质,具有预测的信号肽和 C 末端疏水性α-螺旋。STAMP 与“植原体 asteris”菌株的 AMP 有 26-40%的同一性,与“Ca. P. japonicum”的 AMP 有 40%的同一性。在大肠杆菌中表达 STAMP 产生了一个 16 kDa 的肽,被抗茎点黄斑单克隆抗体识别。与管家基因 secY 相比,Stamp 的变异性更大,非同义突变与同义突变的比值(dN/dS)Stamp 为 2.78,而 secY 为 0.64。这表明 stamp 受到正向多样化选择压力的影响。

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