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植物长距离示踪剂迁移的分析模型。

Analytical model for long-distance tracer-transport in plants.

机构信息

IBG-2: Plant Sciences, Forschungszentrum Jülich, 52425 Jülich, Germany.

出版信息

J Theor Biol. 2011 Feb 7;270(1):70-9. doi: 10.1016/j.jtbi.2010.11.005. Epub 2010 Nov 5.

DOI:10.1016/j.jtbi.2010.11.005
PMID:21056579
Abstract

Recent investigations of long-distance transport in plants using non-invasive tracer techniques such as (11)C radiolabeling monitored by positron emission tomography (PET) combined with magnetic resonance imaging (MRI) revealed the need of dedicated methods to allow a quantitative data analysis and comparison of such experiments. A mechanistic compartmental tracer transport model is presented, defined by a linear system of partial differential equations (PDEs). This model simplifies the complexity of axial transport and lateral exchanges in the transport pathways of plants (e.g. the phloem) by simulating transport and reversible exchange within three compartments using just a few parameters which are considered to be constant in space and time. For this system of PDEs an analytical solution in Fourier-space was found allowing a fast and numerically precise evaluation. From the steady-state behavior of the model, the system loss (steadily fixed tracer along the transport conduits) was derived as an additional parameter that can be readily interpreted in a physiological way. The presented framework allows the model to be fitted to spatio-temporal tracer profiles including error and sensitivity analysis of the estimated parameters. This is demonstrated for PET data sets obtained from radish, sugar beet and maize plants.

摘要

最近使用非侵入性示踪技术(如 11C 放射性标记,结合正电子发射断层扫描(PET)和磁共振成像(MRI))对植物的长距离运输进行的研究表明,需要专门的方法来允许对这些实验进行定量数据分析和比较。提出了一种机械分区示踪剂运输模型,由线性偏微分方程组(PDE)定义。该模型通过使用仅几个被认为在空间和时间上是常数的参数模拟植物(例如韧皮部)运输途径中的轴向运输和横向交换,从而简化了运输的复杂性。对于这个 PDE 系统,在傅立叶空间中找到了一个解析解,允许快速和数值精确的评估。从模型的稳态行为中,推导出系统损耗(沿运输导管稳定固定示踪剂)作为一个附加参数,可以用生理方式解释。所提出的框架允许模型拟合时空示踪剂分布,包括对估计参数的误差和敏感性分析。这对于从小萝卜、甜菜和玉米植物中获得的 PET 数据集进行了演示。

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