Institute of Molecular and Cellular Biology, Leeds University, Leeds, UK.
Biophys J. 2010 Nov 17;99(10):3336-44. doi: 10.1016/j.bpj.2010.09.014.
We have studied the shape of myosin VI, the actin minus-end directed motor, by negative stain and metal shadow electron microscopy. Single particle processing was used to make two-dimensional averages of the stain images, which greatly increases the clarity and allows detailed comparisons with crystal structures. A total of 169,964 particle images were obtained from two different constructs in six different states (four nucleotide states and with and without Ca(2+)). The shape of truncated apo myosin VI was very similar to the apo crystal structure, with the lever arm bent strongly backward and around the motor domain. In the full-length molecule, the C-terminal part of the tail has an additional bend taking it back across the motor domain, which may reflect a regulated state. Addition of ATP, ADP, or ATP-γS resulted in a large change, straightening the molecule from the bent shape and swinging the lever by ∼140°. Although these nucleotides would not be expected to produce the pre-powerstroke state, myosin VI in their presence was most similar to the truncated crystal structure with bound ADP-VO(4), which is thought to show the pre-powerstroke shape. The nucleotide data were therefore substantially different from expectation based on crystal structures. The full-length molecule was almost completely monomeric; only ∼1% were dimers, joined through the ends of the tail. Addition of calcium ions appeared to result in release of the second calmodulin light chain. In negatively stained molecules there was little indication of extended α-helical structure in the tail, but molecules viewed by metal shadowing had a tail ∼3× longer, 29 vs. 9 nm, part of which is likely to be a single α-helix.
我们通过负染色和金属阴影电子显微镜研究了肌球蛋白 VI 的形状,肌球蛋白 VI 是一种指向肌动蛋白负端的运动蛋白。通过单颗粒处理对染色图像进行二维平均,这极大地提高了清晰度,并允许与晶体结构进行详细比较。总共从两种不同的构建体的六个不同状态(四个核苷酸状态和有或没有 Ca(2+))中获得了 169964 个粒子图像。截短的 apo 肌球蛋白 VI 的形状与 apo 晶体结构非常相似,其杠杆臂强烈向后弯曲并绕过马达域。在全长分子中,尾部的 C 末端有一个额外的弯曲,将其带回到马达域后面,这可能反映了一种调节状态。添加 ATP、ADP 或 ATP-γS 会导致很大的变化,使分子从弯曲形状变直,并使杠杆臂摆动约 140°。尽管这些核苷酸不应产生预功状态,但存在这些核苷酸的肌球蛋白 VI 与结合 ADP-VO(4)的截短晶体结构最相似,后者被认为显示了预功状态的形状。因此,核苷酸数据与基于晶体结构的预期有很大不同。全长分子几乎完全是单体;只有约 1%是二聚体,通过尾部末端连接。添加钙离子似乎导致第二个钙调蛋白轻链的释放。在负染色分子中,尾部几乎没有显示出延伸的 α-螺旋结构的迹象,但通过金属阴影观察的分子的尾部约长 3 倍,29 纳米对 9 纳米,其中一部分可能是单个 α-螺旋。