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基于 3D-QSAR 和对接方法的咪唑并[4,5-b]吡啶衍生物作为 Aurora A 激酶抑制剂的分子模拟研究。

Molecular modeling studies on imidazo[4,5-b]pyridine derivatives as Aurora A kinase inhibitors using 3D-QSAR and docking approaches.

机构信息

Guangdong Province Key Laboratory of Pharmacodynamic Constituents of TCM and New Drugs Research, College of Pharmacy, Jinan University, Guangzhou 510632, PR China.

出版信息

Eur J Med Chem. 2011 Jan;46(1):77-94. doi: 10.1016/j.ejmech.2010.10.017. Epub 2010 Oct 26.

Abstract

3D-QSAR and docking studies were performed on sixty imidazo[4,5-b]pyridine derivatives as Aurora A kinase inhibitors. The CoMFA and CoMSIA models using forthy-eight molecules in the training set, gave r(cv)(2) values of 0.774 and 0.800, r(2) values of 0.975 and 0.977, respectively. The external validation indicated that both CoMFA and CoMSIA models possessed high predictive powers with r(pred)(2) values of 0.933 and 0.959, r(m)(2) values of 0.883 and 0.915, respectively. 3D contour maps generated from the two models along with docking binding structures have identified several key structural requirements responsible for the activity. A set of thirty new analogues were proposed by utilizing the results revealed in the present study, and were predicted with significantly improved potencies in the developed models.

摘要

对作为 Aurora A 激酶抑制剂的 60 种咪唑并[4,5-b]吡啶衍生物进行了 3D-QSAR 和对接研究。在训练集中使用 48 个分子的 CoMFA 和 CoMSIA 模型,得到了 r(cv)(2)值为 0.774 和 0.800,r(2)值为 0.975 和 0.977。外部验证表明,CoMFA 和 CoMSIA 模型都具有较高的预测能力,r(pred)(2)值分别为 0.933 和 0.959,r(m)(2)值分别为 0.883 和 0.915。从两个模型生成的 3D 等高线图以及对接结合结构确定了几个负责活性的关键结构要求。利用本研究中揭示的结果,提出了一组 30 种新的类似物,并在开发的模型中预测了它们具有显著提高的效力。

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