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结核分枝杆菌 CYP125A1 的Ⅰ型抑制剂的反向抑制剂。

Reverse type I inhibitor of Mycobacterium tuberculosis CYP125A1.

机构信息

Department of Pharmaceutical Chemistry and Sandler Center for Drug Discovery, University of California, San Francisco, CA 94158, USA.

出版信息

Bioorg Med Chem Lett. 2011 Jan 1;21(1):332-7. doi: 10.1016/j.bmcl.2010.11.007. Epub 2010 Nov 5.

Abstract

Cytochrome P450 CYP125A1 of Mycobacterium tuberculosis, a potential therapeutic target for tuberculosis in humans, initiates degradation of the aliphatic chain of host cholesterol and is essential for establishing M. tuberculosis infection in a mouse model of disease. We explored the interactions of CYP125A1 with a reverse type I inhibitor by X-ray structure analysis and UV-vis spectroscopy. Compound LP10 (α-[(4-methylcyclohexyl)carbonyl amino]-N-4-pyridinyl-1H-indole-3-propanamide), previously identified as a potent type II inhibitor of Trypanosomacruzi CYP51, shifts CYP125A1 to a water-coordinated low-spin state upon binding with low micromolar affinity. When LP10 is present in the active site, the crystal structure and spectral characteristics both demonstrate changes in lipophilic and electronic properties favoring coordination of the iron axial water ligand. These results provide an insight into the structural requirements for developing selective CYP125A1 inhibitors.

摘要

结核分枝杆菌细胞色素 P450 CYP125A1,人类结核病的潜在治疗靶点,可启动宿主胆固醇的脂肪链降解,并且对于在疾病小鼠模型中建立结核分枝杆菌感染是必需的。我们通过 X 射线结构分析和紫外可见光谱研究了 CYP125A1 与反向 I 型抑制剂的相互作用。先前被鉴定为克氏锥虫 CYP51 的有效 II 型抑制剂的化合物 LP10(α-[(4-甲基环己基)羰基氨基]-N-4-吡啶基-1H-吲哚-3-丙酰胺),与低微摩尔亲和力结合后将 CYP125A1 转移到水配位的低自旋状态。当 LP10 存在于活性位点时,晶体结构和光谱特征均表明亲脂性和电子性质的变化有利于铁轴向水配体的配位。这些结果为开发选择性 CYP125A1 抑制剂提供了结构要求的深入了解。

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1
Structural control of cytochrome P450-catalyzed ω-hydroxylation.
Arch Biochem Biophys. 2011 Mar 1;507(1):86-94. doi: 10.1016/j.abb.2010.08.011. Epub 2010 Aug 19.
2
Mycobacterium tuberculosis CYP125A1, a steroid C27 monooxygenase that detoxifies intracellularly generated cholest-4-en-3-one.
Mol Microbiol. 2010 Aug;77(3):730-42. doi: 10.1111/j.1365-2958.2010.07243.x. Epub 2010 Jun 10.
3
A nonazole CYP51 inhibitor cures Chagas' disease in a mouse model of acute infection.
Antimicrob Agents Chemother. 2010 Jun;54(6):2480-8. doi: 10.1128/AAC.00281-10. Epub 2010 Apr 12.
4
Identification of small-molecule scaffolds for p450 inhibitors.
Curr Protoc Microbiol. 2010 Feb;Chapter 17:Unit17.4. doi: 10.1002/9780471729259.mc1704s16.
5
Biochemical and structural characterization of CYP124: a methyl-branched lipid omega-hydroxylase from Mycobacterium tuberculosis.
Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20687-92. doi: 10.1073/pnas.0907398106. Epub 2009 Nov 20.
6
3-Ketosteroid 9alpha-hydroxylase is an essential factor in the pathogenesis of Mycobacterium tuberculosis.
Mol Microbiol. 2010 Jan;75(1):107-21. doi: 10.1111/j.1365-2958.2009.06957.x. Epub 2009 Nov 10.
8
Mycobacterial cytochrome p450 125 (cyp125) catalyzes the terminal hydroxylation of c27 steroids.
J Biol Chem. 2009 Dec 18;284(51):35534-42. doi: 10.1074/jbc.M109.072132.
9
Cytochrome P450 125 (CYP125) catalyses C26-hydroxylation to initiate sterol side-chain degradation in Rhodococcus jostii RHA1.
Mol Microbiol. 2009 Dec;74(5):1031-43. doi: 10.1111/j.1365-2958.2009.06915.x. Epub 2009 Oct 15.
10
The Mycobacterium tuberculosis cytochrome P450 system.
Arch Biochem Biophys. 2010 Jan 1;493(1):82-95. doi: 10.1016/j.abb.2009.07.011. Epub 2009 Jul 25.

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