Department of Mechanical Engineering, Indian Institute of Technology, Kharagpur 721302, India.
J Mol Model. 2011 Aug;17(8):1911-8. doi: 10.1007/s00894-010-0899-x. Epub 2010 Nov 26.
In this paper, we quantitatively demonstrate that exponentially decaying attractive potentials can effectively mimic strong hydrophobic interactions between monomer units of a polymer chain dissolved in aqueous solvent. Classical approaches to modeling hydrophobic solvation interactions are based on invariant attractive length scales. However, we demonstrate here that the solvation interaction decay length may need to be posed as a function of the relative separation distances and the sizes of the interacting species (or beads or monomers) to replicate the necessary physical interactions. As an illustrative example, we derive a universal scaling relationship for a given solute-solvent combination between the solvation decay length, the bead radius, and the distance between the interacting beads. With our formalism, the hydrophobic component of the net attractive interaction between monomer units can be synergistically accounted for within the unified framework of a simple exponentially decaying potential law, where the characteristic decay length incorporates the distinctive and critical physical features of the underlying interaction. The present formalism, even in a mesoscopic computational framework, is capable of incorporating the essential physics of the appropriate solute-size dependence and solvent-interaction dependence in the hydrophobic force estimation, without explicitly resolving the underlying molecular level details.
在本文中,我们定量证明了指数衰减的吸引力势可以有效地模拟溶解在水性溶剂中的聚合物链单体单元之间的强疏水相互作用。经典的疏水溶剂化相互作用建模方法基于不变的吸引长度尺度。然而,我们在这里证明,溶剂化相互作用衰减长度可能需要根据相对分离距离和相互作用物质(或珠子或单体)的大小来设定,以复制必要的物理相互作用。作为一个说明性的例子,我们为给定的溶质-溶剂组合推导出了一个关于溶剂化衰减长度、珠半径和相互作用珠之间距离的普遍标度关系。在我们的形式主义中,单体单元之间的净吸引力相互作用的疏水分量可以在简单指数衰减势律的统一框架内协同考虑,其中特征衰减长度包含了基础相互作用的独特和关键物理特征。即使在介观计算框架中,本形式主义也能够在疏水力估计中纳入适当的溶质尺寸依赖性和溶剂相互作用依赖性的基本物理,而无需显式解析潜在的分子水平细节。