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Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for genotyping of human platelet-specific antigens.用于人类血小板特异性抗原基因分型的基质辅助激光解吸/电离飞行时间质谱分析
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输血医学中的分子诊断:在毛细管中、芯片上、计算机模拟中还是飞行中?

Molecular Diagnostics in Transfusion Medicine: In Capillary, on a Chip, in Silico, or in Flight?

作者信息

Garritsen Henk S P, Xiu-Cheng Fan Alex, Lenz Daniela, Hannig Horst, Yan Zhong Xiao, Geffers Robert, Lindenmaier Werner, Dittmar Kurt E J, Wörmann Bernhard

机构信息

Institute for Clinical Transfusion Medicine, Department of Hematology/Oncology Städtisches Klinikum Braunschweig gGmbH, Braunschweig, Germany.

出版信息

Transfus Med Hemother. 2009;36(3):181-187. doi: 10.1159/000217719. Epub 2009 May 18.

DOI:10.1159/000217719
PMID:21113259
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2980526/
Abstract

Serology, defined as antibody-based diagnostics, has been regarded as the diagnostic gold standard in transfusion medicine. Nowadays however the impact of molecular diagnostics in transfusion medicine is rapidly growing. Molecular diagnostics can improve tissue typing (HLA typing), increase safety of blood products (NAT testing of infectious diseases), and enable blood group typing in difficult situations (after transfusion of blood products or prenatal non-invasive RhD typing). Most of the molecular testing involves the determination of the presence of single nucleotide polymorphisms (SNPs). Antigens (e.g. blood group antigens) mostly result from single nucleotide differences in critical positions. However, most blood group systems cannot be determined by looking at a single SNP. To identify members of a blood group system a number of critical SNPs have to be taken into account. The platforms which are currently used to perform molecular diagnostics are mostly gel-based, requiring time-consuming multiple manual steps. To implement molecular methods in transfusion medicine in the future the development of higher-throughput SNP genotyping non-gel-based platforms which allow a rapid, cost-effective screening are essential. Because of its potential for automation, high throughput and cost effectiveness the special focus of this paper is a relative new technique: SNP genotyping by MALDI-TOF MS analysis.

摘要

血清学,定义为基于抗体的诊断方法,一直被视为输血医学中的诊断金标准。然而如今,分子诊断在输血医学中的影响正在迅速增长。分子诊断可以改善组织分型(人类白细胞抗原分型),提高血液制品的安全性(传染病核酸检测),并在困难情况下实现血型鉴定(输血后或产前无创RhD血型鉴定)。大多数分子检测涉及单核苷酸多态性(SNP)的存在测定。抗原(如血型抗原)大多源于关键位置的单核苷酸差异。然而,大多数血型系统不能通过观察单个SNP来确定。为了识别血型系统的成员,必须考虑多个关键SNP。目前用于进行分子诊断的平台大多基于凝胶,需要耗时的多个手动步骤。为了在未来的输血医学中应用分子方法,开发高通量、非基于凝胶的SNP基因分型平台至关重要,这些平台能够实现快速、经济高效的筛查。由于其自动化潜力、高通量和成本效益,本文特别关注一种相对较新的技术:通过基质辅助激光解吸电离飞行时间质谱分析进行SNP基因分型。