Department of Plant Systems Biology, VIB, 9052 Gent, Belgium.
J Proteome Res. 2011 Mar 4;10(3):1018-29. doi: 10.1021/pr100785n. Epub 2011 Jan 25.
Plants respond to environmental stress by dynamically reprogramming their growth. Whereas stress onset is accompanied by rapid growth inhibition leading to smaller organs, growth will recover and adapt once the stress conditions become stable and do no threaten plant survival. Here, adaptation of growing Arabidopsis thaliana leaves to mild and prolonged osmotic stress was investigated by means of a complete metabolic labeling strategy with the (15)N-stable isotope as a complement to a previously published transcript and metabolite profiling. Global analysis of protein changes revealed that plastidial ATPase, Calvin cycle, and photorespiration were down-regulated, but mitochondrial ATP synthesis was up-regulated, indicating the importance of mitochondria in preserving plastid functions during water stress. Although transcript and protein data correlated well with the stable and prolonged character of the applied stress, numerous proteins were clearly regulated at the post-transcriptional level that could, at least partly, be related to changes in protein synthesis and degradation. In conclusion, proteomics using the (15)N labeling helped understand the mechanisms underlying growth adaptation to osmotic stress and allowed the identification of candidate genes to improve plant growth under limited water.
植物通过动态重编程其生长来应对环境胁迫。虽然胁迫开始伴随着快速的生长抑制,导致器官变小,但一旦胁迫条件稳定且不再威胁植物生存,生长就会恢复和适应。在这里,通过使用 (15)N 稳定同位素作为之前发表的转录组和代谢物分析的补充的完整代谢标记策略,研究了拟南芥生长叶片对温和且持久的渗透胁迫的适应。对蛋白质变化的全局分析表明,质体 ATP 酶、卡尔文循环和光呼吸受到下调,但线粒体 ATP 合成受到上调,表明在水分胁迫期间,线粒体在维持质体功能方面的重要性。尽管转录组和蛋白质数据与施加胁迫的稳定和持久特征很好地相关,但许多蛋白质显然在转录后水平受到调节,这至少部分与蛋白质合成和降解的变化有关。总之,使用 (15)N 标记的蛋白质组学有助于理解渗透胁迫生长适应的机制,并允许鉴定候选基因以改善有限水条件下的植物生长。