Department of Cell Biology, Lerner Research Institute, Cleveland Clinic, Ohio, USA.
Curr Opin Lipidol. 2011 Apr;22(2):100-5. doi: 10.1097/MOL.0b013e328342a375.
Comparative genomics allows researchers to combine genome-wide association data from humans with studies in animal models in order to assist in the identification of the genes and the genetic variants that modify susceptibility to dyslipidemia and atherosclerosis.
Association and linkage studies in human and rodent species have been successful in identifying genetic loci associated with complex traits, but have been less robust in identifying and validating the responsible gene and/or genetic variants. Recent technological advancements have assisted in the development of comparative genomic approaches, which rely on the combination of human and rodent datasets and bioinformatics tools, followed by the narrowing of concordant loci and improved identification of candidate genes and genetic variants. Additionally, candidate genes and genetic variants identified by these methods have been further validated and functionally investigated in animal models, a process that is not feasible in humans.
Comparative genomic approaches have led to the identification and validation of several new genes, including a few not previously implicated, as modifiers of plasma lipid levels and atherosclerosis, yielding new insights into the biological mechanisms of these complex traits.
比较基因组学使研究人员能够将人类的全基因组关联数据与动物模型研究相结合,以协助确定改变血脂异常和动脉粥样硬化易感性的基因和遗传变异。
在人类和啮齿动物物种中的关联和连锁研究成功地确定了与复杂性状相关的遗传位点,但在确定和验证负责的基因和/或遗传变异方面则不那么稳健。最近的技术进步有助于比较基因组方法的发展,该方法依赖于人类和啮齿动物数据集和生物信息学工具的组合,然后是对一致的基因座进行缩小,以及对候选基因和遗传变异的更好识别。此外,这些方法鉴定的候选基因和遗传变异在动物模型中进一步得到验证和功能研究,这在人类中是不可行的。
比较基因组学方法已经确定和验证了几个新基因,包括一些以前未涉及的基因,作为血浆脂质水平和动脉粥样硬化的修饰基因,为这些复杂性状的生物学机制提供了新的见解。