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细胞培养中的病毒流行病:新型高分辨率数据及其基于渗流理论模型的解释。

Viral epidemics in a cell culture: novel high resolution data and their interpretation by a percolation theory based model.

机构信息

Department of Biological Physics, Eötvös University, Budapest, Hungary.

出版信息

PLoS One. 2010 Dec 20;5(12):e15571. doi: 10.1371/journal.pone.0015571.

DOI:10.1371/journal.pone.0015571
PMID:21187920
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3004943/
Abstract

Because of its relevance to everyday life, the spreading of viral infections has been of central interest in a variety of scientific communities involved in fighting, preventing and theoretically interpreting epidemic processes. Recent large scale observations have resulted in major discoveries concerning the overall features of the spreading process in systems with highly mobile susceptible units, but virtually no data are available about observations of infection spreading for a very large number of immobile units. Here we present the first detailed quantitative documentation of percolation-type viral epidemics in a highly reproducible in vitro system consisting of tens of thousands of virtually motionless cells. We use a confluent astroglial monolayer in a Petri dish and induce productive infection in a limited number of cells with a genetically modified herpesvirus strain. This approach allows extreme high resolution tracking of the spatio-temporal development of the epidemic. We show that a simple model is capable of reproducing the basic features of our observations, i.e., the observed behaviour is likely to be applicable to many different kinds of systems. Statistical physics inspired approaches to our data, such as fractal dimension of the infected clusters as well as their size distribution, seem to fit into a percolation theory based interpretation. We suggest that our observations may be used to model epidemics in more complex systems, which are difficult to study in isolation.

摘要

由于其与日常生活息息相关,病毒感染的传播一直是参与抗击、预防和从理论上解释流行过程的各种科学领域的核心关注点。最近的大规模观测结果在具有高度移动易感染单位的系统中对传播过程的整体特征产生了重大发现,但实际上几乎没有关于大量固定不动的单位的感染传播观测数据。在这里,我们在一个由数万个几乎静止不动的细胞组成的高度可重复的体外系统中,首次详细记录了具有渗流型特征的病毒流行病。我们使用培养皿中的连续星形胶质细胞单层,并使用遗传修饰的单纯疱疹病毒株在有限数量的细胞中诱导有性感染。这种方法可以实现对流行病时空发展的极端高分辨率跟踪。我们表明,一个简单的模型能够再现我们观察到的基本特征,即观察到的行为可能适用于许多不同类型的系统。受统计物理学启发的方法对我们的数据进行分析,例如感染簇的分形维数及其大小分布,似乎符合基于渗流理论的解释。我们建议,我们的观察结果可用于对更复杂的系统中的流行病进行建模,而这些系统很难单独进行研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/ff6bc9fd6528/pone.0015571.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/adcde55c501a/pone.0015571.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/7b917c8eb038/pone.0015571.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/0f3feb4836cf/pone.0015571.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/49878e138fed/pone.0015571.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/3921f67f5b3f/pone.0015571.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/045e454466ce/pone.0015571.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/ff6bc9fd6528/pone.0015571.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/adcde55c501a/pone.0015571.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/7b917c8eb038/pone.0015571.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/0f3feb4836cf/pone.0015571.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/49878e138fed/pone.0015571.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/3921f67f5b3f/pone.0015571.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/045e454466ce/pone.0015571.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00cd/3004943/ff6bc9fd6528/pone.0015571.g008.jpg

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J Proteome Res. 2010 Apr 5;9(4):1795-804. doi: 10.1021/pr900926n.
2
Requirement for formin-induced actin polymerization during spread of Shigella flexneri.福马林诱导肌动蛋白聚合在福氏志贺菌扩散过程中的需求。
Infect Immun. 2010 Jan;78(1):193-203. doi: 10.1128/IAI.00252-09. Epub 2009 Oct 19.
3
Understanding the spreading patterns of mobile phone viruses.
PLoS Comput Biol. 2019 Dec 2;15(12):e1007508. doi: 10.1371/journal.pcbi.1007508. eCollection 2019 Dec.
4
Absence of the Tks4 Scaffold Protein Induces Epithelial-Mesenchymal Transition-Like Changes in Human Colon Cancer Cells.Tks4 支架蛋白缺失诱导人结肠癌细胞发生上皮-间充质转化样改变。
Cells. 2019 Oct 29;8(11):1343. doi: 10.3390/cells8111343.
5
Microglia control the spread of neurotropic virus infection via P2Y12 signalling and recruit monocytes through P2Y12-independent mechanisms.小胶质细胞通过 P2Y12 信号控制神经亲和性病毒感染的传播,并通过非 P2Y12 依赖机制招募单核细胞。
Acta Neuropathol. 2018 Sep;136(3):461-482. doi: 10.1007/s00401-018-1885-0. Epub 2018 Jul 19.
6
Differentiation-Dependent Motility-Responses of Developing Neural Progenitors to Optogenetic Stimulation.发育中的神经祖细胞对光遗传学刺激的分化依赖性运动反应。
Front Cell Neurosci. 2017 Dec 19;11:401. doi: 10.3389/fncel.2017.00401. eCollection 2017.
了解手机病毒的传播模式。
Science. 2009 May 22;324(5930):1071-6. doi: 10.1126/science.1167053. Epub 2009 Apr 2.
4
WiFi networks and malware epidemiology.无线网络与恶意软件传播
Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1318-23. doi: 10.1073/pnas.0811973106. Epub 2009 Jan 26.
5
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Curr Protoc Microbiol. 2006 Jun;Chapter 9:9B.4.1-9B.4.25. doi: 10.1002/9780471729259.mc09b04s01.
6
Image-guided modeling of virus growth and spread.病毒生长与传播的图像引导建模
Bull Math Biol. 2008 Aug;70(6):1730-48. doi: 10.1007/s11538-008-9316-3. Epub 2008 Apr 25.
7
Epidemic modeling in metapopulation systems with heterogeneous coupling pattern: theory and simulations.具有异质耦合模式的集合种群系统中的流行病建模:理论与模拟
J Theor Biol. 2008 Apr 7;251(3):450-67. doi: 10.1016/j.jtbi.2007.11.028. Epub 2007 Nov 29.
8
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Science. 2007 Jun 1;316(5829):1298-301. doi: 10.1126/science.1134695.
9
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10
Networks and epidemic models.网络与流行病模型。
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