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6q26-q27 常见变异与亚洲人群的远端结肠癌相关。

Common variant in 6q26-q27 is associated with distal colon cancer in an Asian population.

机构信息

Laboratory of Molecular Medicine, Human Genome Center, Institute of Medical Science, The University of Tokyo, Minato-ku, Tokyo 108-8639, Japan.

出版信息

Gut. 2011 Jun;60(6):799-805. doi: 10.1136/gut.2010.215947. Epub 2011 Jan 17.

Abstract

BACKGROUND AND AIM

Colorectal cancer (CRC) is a multifactorial disease with both environmental and genetic factors contributing to its development. The incidence of CRC is increasing year by year in Japan. Patients with CRC in advanced stages have a poor prognosis, but detection of CRC at earlier stages can improve clinical outcome. Therefore, identification of epidemiologial factors that influence development of CRC would facilitate the prevention or early detection of disease.

METHODS

To identify loci associated with CRC risk, we performed a genome-wide association study (GWAS) for CRC and sub-analyses by tumour location using 1583 Japanese CRC cases and 1898 controls. Subsequently, we conducted replication analyses using a total of 4809 CRC cases and 2973 controls including 225 Korean subjects with distal colon cancer and 377 controls.

RESULTS

We identified a novel locus on 6q26-q27 region (rs7758229 in SLC22A3, p = 7.92 × 10⁻⁹, OR of 1.28) that was significantly associated with distal colon cancer. We also replicated the association between CRC and SNPs on 8q24 (rs6983267 and rs7837328, p = 1.51 × 10⁻⁸ and 7.44 × 10⁻⁸, ORs of 1.18 and 1.17, respectively). Moreover, we found cumulative effects of three genetic factors (rs7758229, rs6983267, and rs4939827 in SMAD7) and one environmental factor (alcohol drinking) which appear to increase CRC risk approximately twofold.

CONCLUSIONS

We found a novel susceptible locus in SLC22A3 that contributes to the risk of distal colon cancer in an Asian population. These findings would further extend our understanding of the role of common genetic variants in the aetiology of CRC.

摘要

背景与目的

结直肠癌(CRC)是一种多因素疾病,其发生发展既有环境因素,也有遗传因素。日本 CRC 的发病率逐年上升。晚期 CRC 患者预后较差,但早期发现 CRC 可改善临床结局。因此,确定影响 CRC 发生发展的流行病学因素将有助于疾病的预防或早期发现。

方法

为了确定与 CRC 风险相关的基因座,我们对 1583 例日本 CRC 病例和 1898 例对照进行了全基因组关联研究(GWAS),并按肿瘤部位进行了亚分析。随后,我们使用包括 225 例韩国远端结肠癌患者和 377 例对照在内的总共 4809 例 CRC 病例和 2973 例对照进行了复制分析。

结果

我们在 6q26-q27 区域(SLC22A3 中的 rs7758229,p=7.92×10⁻⁹,OR 为 1.28)发现了一个新的基因座,该基因座与远端结肠癌显著相关。我们还复制了 CRC 与 8q24 上 SNP(rs6983267 和 rs7837328,p=1.51×10⁻⁸ 和 7.44×10⁻⁸,OR 分别为 1.18 和 1.17)之间的关联。此外,我们发现三个遗传因素(SMAD7 中的 rs7758229、rs6983267 和 rs4939827)和一个环境因素(饮酒)的累积效应似乎使 CRC 风险增加了约两倍。

结论

我们在 SLC22A3 中发现了一个新的易感基因座,该基因座与亚洲人群中远端结肠癌的风险有关。这些发现将进一步扩展我们对常见遗传变异在 CRC 病因学中的作用的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bbd/3095478/b61e894253a1/gutjnl215947fig1.jpg

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