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Quaking 通过其在少突前体细胞中的 3'UTR 调控 Hnrnpa1 的表达。

Quaking regulates Hnrnpa1 expression through its 3' UTR in oligodendrocyte precursor cells.

机构信息

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.

出版信息

PLoS Genet. 2011 Jan 6;7(1):e1001269. doi: 10.1371/journal.pgen.1001269.

Abstract

In mice, Quaking (Qk) is required for myelin formation; in humans, it has been associated with psychiatric disease. QK regulates the stability, subcellular localization, and alternative splicing of several myelin-related transcripts, yet little is known about how QK governs these activities. Here, we show that QK enhances Hnrnpa1 mRNA stability by binding a conserved 3' UTR sequence with high affinity and specificity. A single nucleotide mutation in the binding site eliminates QK-dependent regulation, as does reduction of QK by RNAi. Analysis of exon expression across the transcriptome reveals that QK and hnRNP A1 regulate an overlapping subset of transcripts. Thus, a simple interpretation is that QK regulates a large set of oligodendrocyte precursor genes indirectly by increasing the intracellular concentration of hnRNP A1. Together, the data show that hnRNP A1 is an important QK target that contributes to its control of myelin gene expression.

摘要

在小鼠中,Quaking(Qk) 是髓鞘形成所必需的;在人类中,它与精神疾病有关。QK 调节几种与髓鞘相关的转录本的稳定性、亚细胞定位和选择性剪接,但关于 QK 如何调控这些活性知之甚少。在这里,我们表明 QK 通过高亲和力和特异性结合保守的 3'UTR 序列来增强 Hnrnpa1 mRNA 的稳定性。结合位点的单个核苷酸突变消除了 QK 依赖性调节,RNAi 降低 QK 也会消除其依赖性调节。对整个转录组的外显子表达分析表明,QK 和 hnRNP A1 调节一组重叠的转录本。因此,可以简单地解释为,QK 通过增加 hnRNP A1 的细胞内浓度,间接地调节一大组少突胶质前体细胞基因。总之,这些数据表明 hnRNP A1 是 QK 的一个重要靶标,有助于其对髓鞘基因表达的控制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/18db/3017110/456dfa3ad5cd/pgen.1001269.g001.jpg

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本文引用的文献

1
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W755-62. doi: 10.1093/nar/gkq405. Epub 2010 May 31.
2
Mechanisms for nonrecurrent genomic rearrangements associated with CMT1A or HNPP: rare CNVs as a cause for missing heritability.
Am J Hum Genet. 2010 Jun 11;86(6):892-903. doi: 10.1016/j.ajhg.2010.05.001. Epub 2010 May 20.
3
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
Cell. 2010 Apr 2;141(1):129-41. doi: 10.1016/j.cell.2010.03.009.
4
Haploinsufficiency of the gene Quaking (QKI) is associated with the 6q terminal deletion syndrome.
Am J Med Genet A. 2010 Feb;152A(2):319-26. doi: 10.1002/ajmg.a.33202.
5
Microduplications of 16p11.2 are associated with schizophrenia.
Nat Genet. 2009 Nov;41(11):1223-7. doi: 10.1038/ng.474. Epub 2009 Oct 25.
6
Characterization of QKI gene expression, genetics, and epigenetics in suicide victims with major depressive disorder.
Biol Psychiatry. 2009 Nov 1;66(9):824-31. doi: 10.1016/j.biopsych.2009.05.010. Epub 2009 Jul 9.
7
Posttranscriptional regulation of miRNAs harboring conserved terminal loops.
Mol Cell. 2008 Nov 7;32(3):383-93. doi: 10.1016/j.molcel.2008.10.013.
8
CLIP: crosslinking and immunoprecipitation of in vivo RNA targets of RNA-binding proteins.
Methods Mol Biol. 2008;488:85-98. doi: 10.1007/978-1-60327-475-3_6.
9
HITS-CLIP yields genome-wide insights into brain alternative RNA processing.
Nature. 2008 Nov 27;456(7221):464-9. doi: 10.1038/nature07488. Epub 2008 Nov 2.
10
Large recurrent microdeletions associated with schizophrenia.
Nature. 2008 Sep 11;455(7210):232-6. doi: 10.1038/nature07229.

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