Grossart Hans-Peter, Tang Kam W
Department of Limnology of Stratified Lakes; Leibniz Institute of Freshwater Ecology and Inland Fisheries; Stechlin, Germany.
Commun Integr Biol. 2010 Nov;3(6):491-4. doi: 10.4161/cib.3.6.12975. Epub 2010 Nov 1.
Despite recent advances and new applications of molecular and biogeochemical methodology in aquatic microbial ecology, our perception of the aquatic microbial world remains one dominated by "free-living" bacteria that account for most of the microbial activities in the pelagic zone. Recent research has, however, shown that there exist vast and hidden "microbial networks" within the water column, connected via various microhabitats such as aggregates, fecal pellets and higher organisms. Bacterial abundance within these networks may rival or exceed that of the "free-living" bacteria. Hence, what we have learned in traditional aquatic microbial ecology represents merely a fraction of the microbial world. Within these networks a bacterium can travel long distances, communicate and closely interact with other bacteria and efficiently exchange genetic information with one another. The presence of microbial networks within the water column demands better sampling strategies and a new way to understand bacterial ecology, evolution and functions within the broader context of systems biology.
尽管分子和生物地球化学方法在水生微生物生态学领域有了最新进展和新应用,但我们对水生微生物世界的认知仍主要受“自由生活”细菌主导,这些细菌占了远洋区大多数微生物活动。然而,最近的研究表明,水柱中存在庞大且隐蔽的“微生物网络”,它们通过各种微生境相互连接,如聚集体、粪便颗粒和高等生物。这些网络中的细菌丰度可能与“自由生活”细菌相当或超过后者。因此,我们在传统水生微生物生态学中学到的知识仅仅代表了微生物世界的一小部分。在这些网络中,细菌可以远距离移动,与其他细菌交流并紧密互动,还能彼此高效地交换遗传信息。水柱中微生物网络的存在需要更好的采样策略,以及一种在系统生物学更广泛背景下理解细菌生态学、进化和功能的新方法。