Kopp Maren, Irschik Herbert, Gemperlein Katja, Buntin Kathrin, Meiser Peter, Weissman Kira J, Bode Helge B, Müller Rolf
Helmholtz Institute for Pharmaceutical Research, Helmholtz Center for Infection Research and Department of Pharmaceutical Biotechnology, Saarland University, PO Box 151150, 66041 Saarbrücken, Germany.
Mol Biosyst. 2011 May;7(5):1549-63. doi: 10.1039/c0mb00240b. Epub 2011 Mar 1.
The anti-fungal leupyrrins are secondary metabolites produced by several strains of the myxobacterium Sorangium cellulosum. These intriguing compounds incorporate an atypically substituted γ-butyrolactone ring, as well as pyrrole and oxazolinone functionalities, which are located within an unusual asymmetrical macrodiolide. Previous feeding studies revealed that this novel structure arises from the homologation of four distinct structural units, nonribosomally-derived peptide, polyketide, isoprenoid and a dicarboxylic acid, coupled with modification of the various building blocks. Here we have attempted to reconcile the biosynthetic pathway proposed on the basis of the feeding studies with the underlying enzymatic machinery in the S. cellulosum strain So ce690. Gene products can be assigned to many of the suggested steps, but inspection of the gene set provokes the reconsideration of several key transformations. We support our analysis by the reconstitution in vitro of the biosynthesis of the pyrrole carboxylic starter unit along with gene inactivation. In addition, this study reveals that a significant proportion of the genes for leupyrrin biosynthesis are located outside the core cluster, a 'split' organization which is increasingly characteristic of the myxobacteria. Finally, we report the generation of four novel deshydroxy leupyrrin analogues by genetic engineering of the pathway.
抗真菌的亮吡菌素是由几种粘细菌纤维堆囊菌菌株产生的次生代谢产物。这些引人入胜的化合物包含一个非典型取代的γ-丁内酯环,以及吡咯和恶唑啉酮官能团,它们位于一个不同寻常的不对称大环二内酯内。先前的饲喂研究表明,这种新颖的结构源于四个不同结构单元(非核糖体来源的肽、聚酮化合物、类异戊二烯和二羧酸)的同系化,以及各种构建模块的修饰。在这里,我们试图将基于饲喂研究提出的生物合成途径与纤维堆囊菌菌株So ce690中的潜在酶机制相协调。基因产物可以被指定到许多建议的步骤中,但对基因组的检查引发了对几个关键转化的重新思考。我们通过体外重建吡咯羧酸起始单元的生物合成以及基因失活来支持我们的分析。此外,这项研究表明,亮吡菌素生物合成的很大一部分基因位于核心簇之外,这种“分裂”组织越来越成为粘细菌的特征。最后,我们报告了通过该途径的基因工程产生的四种新型去羟基亮吡菌素类似物。