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红平红球菌NCIMB 13064 DhaA突变体DhaA31及其与1,2,3-三氯丙烷复合物的结晶与晶体学分析。

Crystallization and crystallographic analysis of the Rhodococcus rhodochrous NCIMB 13064 DhaA mutant DhaA31 and its complex with 1,2,3-trichloropropane.

作者信息

Lahoda Maryna, Chaloupkova Radka, Stsiapanava Alena, Damborsky Jiri, Kuta Smatanova Ivana

机构信息

Institute of Physical Biology, University of South Bohemia, Ceske Budejovice, Zamek 136, 373 33 Nove Hrady, Czech Republic.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Mar 1;67(Pt 3):397-400. doi: 10.1107/S1744309111001254. Epub 2011 Feb 25.

Abstract

Haloalkane dehalogenases hydrolyze carbon-halogen bonds in a wide range of halogenated aliphatic compounds. The potential use of haloalkane dehalogenases in bioremediation applications has stimulated intensive investigation of these enzymes and their engineering. The mutant DhaA31 was constructed to degrade the anthropogenic compound 1,2,3-trichloropropane (TCP) using a new strategy. This strategy enhances activity towards TCP by decreasing the accessibility of the active site to water molecules, thereby promoting formation of the activated complex. The structure of DhaA31 will help in understanding the structure-function relationships involved in the improved dehalogenation of TCP. The mutant protein DhaA31 was crystallized by the sitting-drop vapour-diffusion technique and crystals of DhaA31 in complex with TCP were obtained using soaking experiments. Both crystals belonged to the triclinic space group P1. Diffraction data were collected to high resolution: to 1.31 Å for DhaA31 and to 1.26 Å for DhaA31 complexed with TCP.

摘要

卤代烷脱卤酶可水解多种卤代脂肪族化合物中的碳 - 卤键。卤代烷脱卤酶在生物修复应用中的潜在用途激发了对这些酶及其工程改造的深入研究。突变体DhaA31是采用一种新策略构建的,用于降解人为合成化合物1,2,3 - 三氯丙烷(TCP)。该策略通过降低活性位点对水分子的可及性来增强对TCP的活性,从而促进活化复合物的形成。DhaA31的结构将有助于理解TCP脱卤作用改善过程中涉及的结构 - 功能关系。突变蛋白DhaA31通过坐滴气相扩散技术结晶,并通过浸泡实验获得了与TCP结合的DhaA31晶体。两种晶体均属于三斜晶系空间群P1。收集到了高分辨率的衍射数据:DhaA31的衍射数据分辨率达到1.31 Å,与TCP结合的DhaA31的衍射数据分辨率达到1.26 Å。

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