School of Biology, University of Newcastle, Newcastle upon Tyne NE1 7RU, UK.
Departamento de Entomologia and Acarologia, ESALQ, Universidade de São Paulo, Piracicaba, Brazil.
Int J Syst Evol Microbiol. 2012 Feb;62(Pt 2):279-283. doi: 10.1099/ijs.0.029983-0. Epub 2011 Mar 11.
The taxonomic position of a streptomycete isolated from soil collected from Cockle Park Experimental Farm, Northumberland, UK, was determined by using a polyphasic approach. The organism had chemical and morphological features consistent with its classification in the genus Streptomyces. 16S rRNA gene sequence analysis supported classification of the strain in the genus Streptomyces and showed that it formed a distinct phyletic line loosely associated with members of the Streptomyces yeochonensis clade. It was related most closely to Streptomyces paucisporeus 1413(T) (98.6 %16S rRNA gene sequence similarity), but could be distinguished from the latter based on the low level of DNA-DNA relatedness (40 %). It was readily distinguished from the type strains of all species assigned to the S. yeochonensis clade based on a combination of phenotypic properties. Strain BK168(T) ( = KACC 20908(T) = NCIMB 14704(T)) should therefore be classified as the type strain of a novel species of the genus Streptomyces, for which the name Streptomyces cocklensis sp. nov. is proposed. The organism produces the antibiotic dioxamycin.
从英国诺森伯兰郡 Cockle 公园实验农场采集的土壤中分离得到的链霉菌的分类地位,通过多相分类法来确定。该菌株的化学和形态特征与其在链霉菌属中的分类一致。16S rRNA 基因序列分析支持将该菌株分类为链霉菌属,并表明它形成了一个与链霉菌属 yeochonensis 分支成员松散相关的独特进化枝。它与稀少孢菌素链霉菌 1413(T)(98.6% 16S rRNA 基因序列相似性)最为密切相关,但基于低水平的 DNA-DNA 同源性(40%),可以将其与后者区分开来。根据表型特性的组合,它很容易与所有归属于链霉菌属 yeochonensis 分支的模式菌株区分开来。因此,菌株 BK168(T)(=KACC 20908(T)=NCIMB 14704(T))应被分类为链霉菌属的一个新种的模式菌株,提议将其命名为 Cockle 链霉菌新种。该生物产生抗生素二恶霉素。