• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用基于U1A的标记RNA系统对RNA进行体内可视化。

In vivo visualization of RNA using the U1A-based tagged RNA system.

作者信息

Chung Sunglan, Takizawa Peter A

机构信息

Department of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.

出版信息

Methods Mol Biol. 2011;714:221-35. doi: 10.1007/978-1-61779-005-8_14.

DOI:10.1007/978-1-61779-005-8_14
PMID:21431744
Abstract

mRNA transport is a widely used method to achieve the asymmetric distribution of proteins within a cell or organism. In order to understand how RNA is transported, it is essential to utilize a system that can readily detect RNA movement in live cells. The tagged RNA system has recently emerged as a feasible non-invasive solution for such purpose. In this chapter, we describe in detail the U1A-based tagged RNA system. This system coexpresses U1Ap-GFP with the RNA of interest tagged with U1A aptamers, and has been proven to effectively track RNA in vivo. In addition, we provide further applications of the system for ribonucleoprotein complex purification by TAP-tagging the U1Ap-GFP construct.

摘要

信使核糖核酸(mRNA)运输是一种广泛应用的方法,用于在细胞或生物体内实现蛋白质的不对称分布。为了理解RNA是如何运输的,利用一个能够在活细胞中轻松检测RNA移动的系统至关重要。标记RNA系统最近已成为用于此目的的一种可行的非侵入性解决方案。在本章中,我们详细描述基于U1A的标记RNA系统。该系统将U1Ap-绿色荧光蛋白(GFP)与用U1A适体标记的目标RNA共表达,并且已被证明能在体内有效追踪RNA。此外,我们还介绍了通过对U1Ap-GFP构建体进行串联亲和纯化(TAP)标记,该系统在核糖核蛋白复合物纯化方面的进一步应用。

相似文献

1
In vivo visualization of RNA using the U1A-based tagged RNA system.使用基于U1A的标记RNA系统对RNA进行体内可视化。
Methods Mol Biol. 2011;714:221-35. doi: 10.1007/978-1-61779-005-8_14.
2
Visualizing endogenous mRNAs in living yeast using m-TAG, a PCR-based RNA aptamer integration method, and fluorescence microscopy.使用m-TAG(一种基于PCR的RNA适体整合方法)和荧光显微镜在活酵母中可视化内源性mRNA。
Methods Mol Biol. 2011;714:237-47. doi: 10.1007/978-1-61779-005-8_15.
3
Characterization of yeast U1 snRNP A protein: identification of the N-terminal RNA binding domain (RBD) binding site and evidence that the C-terminal RBD functions in splicing.酵母U1 snRNP A蛋白的特性:N端RNA结合结构域(RBD)结合位点的鉴定以及C端RBD在剪接中发挥作用的证据
RNA. 1996 Oct;2(10):1058-70.
4
An approach to studying the localization and dynamics of eukaryotic translation factors in live yeast cells.一种研究活酵母细胞中真核生物翻译因子的定位和动态变化的方法。
Methods Enzymol. 2007;431:33-45. doi: 10.1016/S0076-6879(07)31003-3.
5
Visual screening for localized RNAs in yeast revealed novel RNAs at the bud-tip.对酵母中局部RNA进行可视化筛选,在芽尖发现了新的RNA。
Biochem Biophys Res Commun. 2006 Dec 29;351(4):999-1004. doi: 10.1016/j.bbrc.2006.10.139. Epub 2006 Nov 2.
6
A simplified vector system for visualization of localized RNAs in Schizosaccharomyces pombe.一种用于在粟酒裂殖酵母中可视化定位RNA的简化载体系统。
Biosci Biotechnol Biochem. 2016 Jul;80(7):1362-7. doi: 10.1080/09168451.2016.1158633. Epub 2016 Mar 15.
7
Anti-U1A monoclonal antibodies recognize unique epitope targets of U1A which are involved in the binding of U1 RNA.抗U1A单克隆抗体识别U1A的独特表位靶点,这些靶点参与U1 RNA的结合。
J Mol Recognit. 2002 May-Jun;15(3):163-70. doi: 10.1002/jmr.569.
8
The NMR structure of the 38 kDa U1A protein - PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein.38 kDa U1A蛋白与PIE RNA复合物的核磁共振结构揭示了人U1A蛋白在多聚腺苷酸化调控中协同作用的基础。
Nat Struct Biol. 2000 Apr;7(4):329-35. doi: 10.1038/74101.
9
Severe axial bending of RNA induced by the U1A binding element present in the 3' untranslated region of the U1A mRNA.U1A mRNA 3'非翻译区中存在的U1A结合元件诱导RNA发生严重的轴向弯曲。
J Mol Biol. 1997 Oct 17;273(1):84-92. doi: 10.1006/jmbi.1997.1289.
10
Changes in side-chain and backbone dynamics identify determinants of specificity in RNA recognition by human U1A protein.侧链和主链动力学的变化确定了人类U1A蛋白识别RNA时特异性的决定因素。
J Mol Biol. 1999 Dec 10;294(4):967-79. doi: 10.1006/jmbi.1999.3311.

引用本文的文献

1
RNA transport from transcription to localized translation: a single molecule perspective.从转录到局部翻译的 RNA 运输:单分子视角。
RNA Biol. 2021 Sep;18(9):1221-1237. doi: 10.1080/15476286.2020.1842631. Epub 2020 Nov 13.
2
The Promise and Challenge of Digital Biology.数字生物学的前景与挑战
J Bioeng Biomed Sci. 2013;3(3). doi: 10.4172/2155-9538.1000e118. Epub 2013 Dec 4.
3
Context-dependent deposition and regulation of mRNAs in P-bodies.在 P 体中,mRNA 的沉积和调控取决于其所处的环境。
Elife. 2018 Jan 3;7:e29815. doi: 10.7554/eLife.29815.