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非酶催化剂和无机焦磷酸酶对焦磷酸水解速率的增强作用。

Enhancement of the rate of pyrophosphate hydrolysis by nonenzymatic catalysts and by inorganic pyrophosphatase.

机构信息

Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, North Carolina 27599, USA.

出版信息

J Biol Chem. 2011 May 27;286(21):18538-46. doi: 10.1074/jbc.M110.214510. Epub 2011 Apr 1.

Abstract

To estimate the proficiency of inorganic pyrophosphatase as a catalyst, (31)P NMR was used to determine rate constants and thermodynamics of activation for the spontaneous hydrolysis of inorganic pyrophosphate (PP(i)) in the presence and absence of Mg(2+) at elevated temperatures. These values were compared with rate constants and activation parameters determined for the reaction catalyzed by Escherichia coli inorganic pyrophosphatase using isothermal titration calorimetry. At 25 °C and pH 8.5, the hydrolysis of MgPP(i)(2-) proceeds with a rate constant of 2.8 × 10(-10) s(-1), whereas E. coli pyrophosphatase was found to have a turnover number of 570 s(-1) under the same conditions. The resulting rate enhancement (2 × 10(12)-fold) is achieved entirely by reducing the enthalpy of activation (ΔΔH(‡) = -16.6 kcal/mol). The presence of Mg(2+) ions or the transfer of the substrate from bulk water to dimethyl sulfoxide was found to increase the rate of pyrophosphate hydrolysis by as much as ∼ 10(6)-fold. Transfer to dimethyl sulfoxide accelerated PP(i) hydrolysis by reducing the enthalpy of activation. Mg(2+) increased the rate of PP(i) hydrolysis by both increasing the entropy of activation and reducing the enthalpy of activation.

摘要

为了评估无机焦磷酸酶作为催化剂的效率,我们使用 31P NMR 来确定在升高的温度下有无 Mg2+存在时,无机焦磷酸(PP(i))自发水解的速率常数和活化热力学。将这些值与使用等温滴定量热法测定的大肠杆菌无机焦磷酸酶催化反应的速率常数和活化参数进行了比较。在 25°C 和 pH 8.5 下,MgPP(i)(2-)的水解反应的速率常数为 2.8×10(-10) s(-1),而在相同条件下,大肠杆菌焦磷酸酶的周转率为 570 s(-1)。这种速率增强(2×10(12)倍)完全是通过降低活化焓(ΔΔH(‡) = -16.6 kcal/mol)实现的。发现 Mg2+离子的存在或底物从本体水转移到二甲基亚砜会使焦磷酸盐的水解速率提高多达约 10(6)倍。向二甲基亚砜的转移通过降低活化焓来加速 PP(i)水解。Mg2+通过增加活化熵和降低活化焓来提高 PP(i)水解的速率。

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