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利用胃内容物 DNA 来确定肉食性鱼类的饮食多样性。

Utilization of stomach content DNA to determine diet diversity in piscivorous fishes.

机构信息

Great Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario, N9B 3P4 Canada.

出版信息

J Fish Biol. 2011 Apr;78(4):1170-82. doi: 10.1111/j.1095-8649.2011.02925.x. Epub 2011 Mar 8.

Abstract

The objective of the study was to validate and apply DNA-based approaches to describe fish diets. Laboratory experiments were performed to determine the number of hours after ingestion that DNA could be reliably isolated from stomach content residues, particularly with small prey fishes (c. 1 cm, <0·75 g). Additionally, experiments were conducted at different temperatures to resolve temperature effects on digestion rate and DNA viability. The molecular protocol of cloning and sequencing was then applied to the analysis of stomach contents of wild fishes collected from the western basin of Lake Erie, Canada-U.S.A. The results showed that molecular techniques were more precise than traditional visual inspection and could provide insight into diet preferences for even highly digested prey that have lost all physical characteristics.

摘要

本研究的目的是验证并应用基于 DNA 的方法来描述鱼类的食性。通过实验室实验确定了从胃内容物残渣中可靠分离 DNA 的时间,特别是在摄入小的猎物鱼(约 1 厘米,<0.75 克)后。此外,还在不同温度下进行了实验,以解决温度对消化率和 DNA 活力的影响。然后,将克隆和测序的分子方案应用于分析从加拿大-美国的伊利湖西部盆地采集的野生鱼类的胃内容物。结果表明,分子技术比传统的视觉检查更精确,并可以深入了解即使是高度消化的猎物的饮食偏好,这些猎物已经失去了所有的物理特征。

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