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通过 15N NMR 弛豫弥散和化学位移分析研究 recoverin 的 Ca2+-豆蔻酰开关的构象动力学。

Conformational dynamics of recoverin's Ca2+-myristoyl switch probed by 15N NMR relaxation dispersion and chemical shift analysis.

机构信息

Department of Chemistry, University of California, Davis, California 95616, USA.

出版信息

Proteins. 2011 Jun;79(6):1910-22. doi: 10.1002/prot.23014. Epub 2011 Apr 4.

Abstract

Recoverin, a member of the neuronal calcium sensor (NCS) branch of the calmodulin superfamily, serves as a calcium sensor in retinal rod cells. Ca(2+) -induced conformational changes in recoverin promote extrusion of its covalently attached myristate, known as the Ca(2+)-myristoyl switch. Here, we present nuclear magnetic resonance (NMR) relaxation dispersion and chemical shift analysis on (15) N-labeled recoverin to probe main chain conformational dynamics. (15) N NMR relaxation data suggest that Ca(2+)-free recoverin undergoes millisecond conformational dynamics at particular amide sites throughout the protein. The addition of trace Ca(2+) levels (0.05 equivalents) increases the number of residues that show detectable relaxation dispersion. The Ca(2+)-dependent chemical shifts and relaxation dispersion suggest that recoverin has an intermediate conformational state (I) between the sequestered apo state (T) and Ca(2+) saturated extruded state (R): T ↔ I ↔ R. The first step is a fast conformational equilibrium ([T]/[I] < 100) on the millisecond time scale (τ(ex) δω < 1). The final step (I ↔ R) is much slower (τ(ex) δω > 1). The main chain structure of I is similar in part to the structure of half-saturated E85Q recoverin with a sequestered myristoyl group. We propose that millisecond dynamics during T ↔ I may transiently increase the exposure of Ca(2+)-binding sites to initiate Ca(2+) binding that drives extrusion of the myristoyl group during I ↔ R.

摘要

恢复蛋白(Recoverin)是钙调蛋白超家族神经元钙传感器(NCS)分支的成员,作为视网膜杆状细胞中的钙传感器。钙(Ca2+)诱导的恢复蛋白构象变化促进其共价连接的豆蔻酸的挤出,这种变化被称为 Ca2+-豆蔻酰开关。在这里,我们通过核磁共振(NMR)弛豫色散和化学位移分析(15)N 标记的恢复蛋白来探测其主链构象动力学。(15)N NMR 弛豫数据表明,无 Ca2+的恢复蛋白在整个蛋白的特定酰胺位点经历毫秒级构象动力学。痕量 Ca2+(0.05 当量)的加入增加了显示可检测弛豫色散的残基数量。Ca2+依赖性化学位移和弛豫色散表明,恢复蛋白在被隔离的无 Ca2+apo 状态(T)和 Ca2+饱和挤出状态(R)之间具有中间构象状态(I):T ↔ I ↔ R。第一步是在毫秒时间尺度上快速构象平衡([T]/[I] < 100)(τ(ex) δω < 1)。最后一步(I ↔ R)要慢得多(τ(ex) δω > 1)。I 的主链结构在某种程度上与半饱和 E85Q 恢复蛋白的结构相似,其豆蔻酰基团被隔离。我们提出,T ↔ I 期间的毫秒动力学可能会短暂增加 Ca2+结合位点的暴露,从而启动 Ca2+结合,驱动 I ↔ R 期间豆蔻酰基团的挤出。

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