School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, New South Wales 2052, Australia.
Environ Microbiol. 2011 Aug;13(8):2232-49. doi: 10.1111/j.1462-2920.2011.02477.x. Epub 2011 Apr 7.
Archaea are abundant in permanently cold environments. The Antarctic methanogen, Methanococcoides burtonii, has proven an excellent model for studying molecular mechanisms of cold adaptation. Methanococcoides burtonii contains three group II chaperonins that diverged prior to its closest orthologues from mesophilic Methanosarcina spp. The relative abundance of the three chaperonins shows little dependence on organism growth temperature, except at the highest temperatures, where the most thermally stable chaperonin increases in abundance. In vitro and in vivo, the M. burtonii chaperonins are predominantly monomeric, with only 23-33% oligomeric, thereby differing from other archaea where an oligomeric ring form is dominant. The crystal structure of an N-terminally truncated chaperonin reveals a monomeric protein with a fully open nucleotide binding site. When compared with closed state group II chaperonin structures, a large-scale ≈ 30° rotation between the equatorial and intermediate domains is observed resulting in an open nucleotide binding site. This is analogous to the transition observed between open and closed states of group I chaperonins but contrasts with recent archaeal group II chaperonin open state ring structures. The predominance of monomeric form and the ability to adopt a fully open nucleotide site appear to be unique features of the M. burtonii group II chaperonins.
古菌在永久寒冷的环境中大量存在。南极产甲烷菌 Methanococcoides burtonii 已被证明是研究冷适应分子机制的极佳模型。Methanococcoides burtonii 含有三种 II 型伴侣蛋白,它们在与嗜温 Methanosarcina spp. 的最接近的同源物分化之前就已经发生了分化。三种伴侣蛋白的相对丰度几乎不受生物体生长温度的影响,除了在最高温度下,最耐热的伴侣蛋白的丰度增加。在体外和体内,M. burtonii 的伴侣蛋白主要是单体,只有 23-33%是寡聚体,这与其他古菌形成寡聚环的形式不同。截短的 N 端伴侣蛋白的晶体结构揭示了一种单体蛋白,其核苷酸结合位点完全打开。与封闭状态的 II 型伴侣蛋白结构相比,观察到赤道和中间结构域之间的大规模 ≈ 30°旋转,从而导致核苷酸结合位点打开。这类似于在 I 型伴侣蛋白的开放和封闭状态之间观察到的转变,但与最近的古菌 II 型伴侣蛋白开放状态环结构形成对比。单体形式的优势和能够采用完全开放的核苷酸结合位点似乎是 M. burtonii II 型伴侣蛋白的独特特征。