Department of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Jerusalem 91904, Israel.
J Struct Biol. 2011 Aug;175(2):171-7. doi: 10.1016/j.jsb.2011.04.005. Epub 2011 Apr 15.
DNA cloning and protein engineering are basic methodologies employed for various applications in all life-science disciplines. Manipulations of DNA however, could be a lengthy process that slows down subsequent experiments. To facilitate both DNA cloning and protein engineering, we present Transfer-PCR (TPCR), a novel approach that integrates in a single tube, PCR amplification of the target DNA from an origin vector and its subsequent integration into the destination vector. TPCR can be applied for incorporation of DNA fragments into any desired position within a circular plasmid without the need for purification of the intermediate PCR product and without the use of any commercial kit. Using several examples, we demonstrate the applicability of the TPCR platform for both DNA cloning and for multiple-site targeted mutagenesis. In both cases, we show that the TPCR reaction is most efficient within a narrow range of primer concentrations. In mutagenesis, TPCR is primarily advantageous for generation of combinatorial libraries of targeted mutants but could be also applied to generation of variants with specific multiple mutations throughout the target gene. Adaptation of the TPCR platform should facilitate, simplify and significantly reduce time and costs for diverse protein structure and functional studies.
DNA 克隆和蛋白质工程是所有生命科学学科中各种应用中使用的基本方法。然而,DNA 的操作可能是一个漫长的过程,会减缓后续实验的速度。为了方便 DNA 克隆和蛋白质工程,我们提出了转移 PCR(TPCR),这是一种新颖的方法,可将目标 DNA 从起始载体的 PCR 扩增与其随后整合到目标载体中集成在一个管中。TPCR 可用于将 DNA 片段整合到环状质粒中的任何所需位置,而无需纯化中间 PCR 产物,也无需使用任何商业试剂盒。通过几个例子,我们证明了 TPCR 平台在 DNA 克隆和多位点靶向诱变中的适用性。在这两种情况下,我们都表明 TPCR 反应在引物浓度的窄范围内效率最高。在诱变中,TPCR 主要有利于生成靶向突变体的组合文库,但也可应用于生成整个目标基因中具有特定多个突变的变体。TPCR 平台的适应应该会简化、简化并大大减少各种蛋白质结构和功能研究的时间和成本。