National Cancer Institute, 6130 Executive Boulevard, Bethesda, MD 20892-7365, USA.
Am J Prev Med. 2011 May;40(5 Suppl 2):S134-43. doi: 10.1016/j.amepre.2011.01.004.
Scientists are taking advantage of the Internet and collaborative web technology to accelerate discovery in a massively connected, participative environment--a phenomenon referred to by some as Science 2.0. As a new way of doing science, this phenomenon has the potential to push science forward in a more efficient manner than was previously possible. The Grid-Enabled Measures (GEM) database has been conceptualized as an instantiation of Science 2.0 principles by the National Cancer Institute (NCI) with two overarching goals: (1) promote the use of standardized measures, which are tied to theoretically based constructs; and (2) facilitate the ability to share harmonized data resulting from the use of standardized measures. The first is accomplished by creating an online venue where a virtual community of researchers can collaborate together and come to consensus on measures by rating, commenting on, and viewing meta-data about the measures and associated constructs. The second is accomplished by connecting the constructs and measures to an ontological framework with data standards and common data elements such as the NCI Enterprise Vocabulary System (EVS) and the cancer Data Standards Repository (caDSR). This paper will describe the web 2.0 principles on which the GEM database is based, describe its functionality, and discuss some of the important issues involved with creating the GEM database such as the role of mutually agreed-on ontologies (i.e., knowledge categories and the relationships among these categories--for data sharing).
科学家们正在利用互联网和协作网络技术,在一个大规模连接、参与式的环境中加速发现,这种现象被一些人称为科学 2.0。作为一种新的科学方法,这种现象有可能以比以前更有效的方式推动科学的发展。国家癌症研究所 (NCI) 将网格启用措施 (GEM) 数据库构想为科学 2.0 原则的实例,其目标有两个:(1) 促进使用与理论基础结构相关联的标准化措施;(2) 促进使用标准化措施所产生的协调数据的共享能力。第一个目标是通过创建一个在线场所来实现的,在这个场所中,一个虚拟的研究人员社区可以共同协作,并通过对措施进行评分、评论和查看措施和相关结构的元数据来对措施达成共识。第二个目标是通过将结构和措施连接到一个本体框架来实现的,该框架具有数据标准和常见的数据元素,如 NCI 企业词汇系统 (EVS) 和癌症数据标准存储库 (caDSR)。本文将描述 GEM 数据库所基于的网络 2.0 原则,描述其功能,并讨论创建 GEM 数据库所涉及的一些重要问题,例如相互同意的本体的作用 (即,知识类别及其之间的关系 - 用于数据共享)。