• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

NPC1L1 分子 N 端结构域的关闭构象。

The structure of the NPC1L1 N-terminal domain in a closed conformation.

机构信息

Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America.

出版信息

PLoS One. 2011 Apr 15;6(4):e18722. doi: 10.1371/journal.pone.0018722.

DOI:10.1371/journal.pone.0018722
PMID:21525977
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3078110/
Abstract

BACKGROUND

NPC1L1 is the molecular target of the cholesterol lowering drug Ezetimibe and mediates the intestinal absorption of cholesterol. Inhibition or deletion of NPC1L1 reduces intestinal cholesterol absorption, resulting in reduction of plasma cholesterol levels.

PRINCIPAL FINDINGS

Here we present the 2.8 Å crystal structure of the N-terminal domain (NTD) of NPC1L1 in the absence of cholesterol. The structure, combined with biochemical data, reveals the mechanism of cholesterol selectivity of NPC1L1. Comparison to the cholesterol free and bound structures of NPC1(NTD) reveals that NPC1L1(NTD) is in a closed conformation and the sterol binding pocket is occluded from solvent.

CONCLUSION

The structure of NPC1L1(NTD) reveals a degree of flexibility surrounding the entrance to the sterol binding pocket, suggesting a gating mechanism that relies on multiple movements around the entrance to the sterol binding pocket.

摘要

背景

NPC1L1 是降脂药物依折麦布的分子靶标,介导胆固醇的肠道吸收。NPC1L1 的抑制或缺失会减少肠道胆固醇吸收,导致血浆胆固醇水平降低。

主要发现

本文呈现了 NPC1L1 无胆固醇状态下的 N 端结构域(NTD)的 2.8Å 晶体结构。该结构与生化数据相结合,揭示了 NPC1L1 胆固醇选择性的机制。与 NPC1(NTD)的无胆固醇和结合胆固醇结构的比较表明,NPC1L1(NTD)处于封闭构象,固醇结合口袋与溶剂隔离。

结论

NPC1L1(NTD)的结构揭示了固醇结合口袋入口周围存在一定程度的灵活性,表明其门控机制依赖于固醇结合口袋入口周围的多个运动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/a8c03bd9aa3a/pone.0018722.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/04413b43b86a/pone.0018722.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/87da427d885b/pone.0018722.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/e06b307fc0df/pone.0018722.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/a8c03bd9aa3a/pone.0018722.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/04413b43b86a/pone.0018722.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/87da427d885b/pone.0018722.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/e06b307fc0df/pone.0018722.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51da/3078110/a8c03bd9aa3a/pone.0018722.g004.jpg

相似文献

1
The structure of the NPC1L1 N-terminal domain in a closed conformation.NPC1L1 分子 N 端结构域的关闭构象。
PLoS One. 2011 Apr 15;6(4):e18722. doi: 10.1371/journal.pone.0018722.
2
Membrane topology of human NPC1L1, a key protein in enterohepatic cholesterol absorption.人NPC1L1的膜拓扑结构,肠肝循环中胆固醇吸收的关键蛋白。
J Lipid Res. 2009 Aug;50(8):1653-62. doi: 10.1194/jlr.M800669-JLR200. Epub 2009 Mar 26.
3
Bean peptides have higher in silico binding affinities than ezetimibe for the N-terminal domain of cholesterol receptor Niemann-Pick C1 Like-1.对于胆固醇受体尼曼-匹克C1样蛋白1(Niemann-Pick C1 Like-1)的N端结构域,豆类肽在计算机模拟中的结合亲和力高于依泽替米贝。
Peptides. 2017 Apr;90:83-89. doi: 10.1016/j.peptides.2017.02.011. Epub 2017 Mar 1.
4
Structural insights into the mechanism of human NPC1L1-mediated cholesterol uptake.解析 NPC1L1 介导的胆固醇摄取机制的结构见解。
Sci Adv. 2021 Jul 16;7(29). doi: 10.1126/sciadv.abg3188. Print 2021 Jul.
5
The N-terminal domain of NPC1L1 protein binds cholesterol and plays essential roles in cholesterol uptake.NPC1L1 蛋白的 N 端结构域与胆固醇结合,并在胆固醇摄取中发挥重要作用。
J Biol Chem. 2011 Jul 15;286(28):25088-97. doi: 10.1074/jbc.M111.244475. Epub 2011 May 20.
6
In vivo responsiveness to ezetimibe correlates with niemann-pick C1 like-1 (NPC1L1) binding affinity: Comparison of multiple species NPC1L1 orthologs.体内对依泽替米贝的反应性与尼曼-匹克C1样1(NPC1L1)结合亲和力相关:多种物种NPC1L1直系同源物的比较。
Mol Pharmacol. 2007 Jan;71(1):19-29. doi: 10.1124/mol.106.027896. Epub 2006 Sep 27.
7
N-terminal domain of the cholesterol transporter Niemann-Pick C1-like 1 (NPC1L1) is essential for α-tocopherol transport.胆固醇转运蛋白尼曼-皮克C1样1(NPC1L1)的N端结构域对α-生育酚的转运至关重要。
Biochem Biophys Res Commun. 2017 Apr 29;486(2):476-480. doi: 10.1016/j.bbrc.2017.03.065. Epub 2017 Mar 16.
8
Niemann-Pick type C disease: a QM/MM study of conformational changes in cholesterol in the NPC1(NTD) and NPC2 binding pockets.尼曼-匹克病 C 型:NPC1(NTD)和 NPC2 结合口袋中胆固醇构象变化的QM/MM 研究。
Biochemistry. 2014 Oct 21;53(41):6603-14. doi: 10.1021/bi500548f. Epub 2014 Oct 10.
9
Cryo-EM structures of NPC1L1 reveal mechanisms of cholesterol transport and ezetimibe inhibition.NPC1L1的冷冻电镜结构揭示了胆固醇转运机制和依泽替米贝抑制作用。
Sci Adv. 2020 Jun 19;6(25):eabb1989. doi: 10.1126/sciadv.abb1989. eCollection 2020 Jun.
10
Computational Modeling Explains the Multi Sterol Ligand Specificity of the N-Terminal Domain of Niemann-Pick C1-Like 1 Protein.计算建模解释了尼曼-皮克C1样1蛋白N端结构域的多甾醇配体特异性。
ACS Omega. 2019 Dec 3;4(25):20894-20904. doi: 10.1021/acsomega.9b01668. eCollection 2019 Dec 17.

引用本文的文献

1
Suppressive Effect of Coffee Leaves on Lipid Digestion and Absorption In Vitro.咖啡叶对体外脂质消化和吸收的抑制作用
Foods. 2024 Aug 2;13(15):2445. doi: 10.3390/foods13152445.
2
Genome-wide association study and meta-analysis of phytosterols identifies a novel locus for serum levels of campesterol.全基因组关联研究和荟萃分析鉴定了菜油甾醇血清水平的一个新位点。
Hum Genomics. 2024 Aug 1;18(1):85. doi: 10.1186/s40246-024-00649-x.
3
NPC1L1 rs217434 A > G as a Novel Single Nucleotide Polymorphism Related to Dyslipidemia in a Korean Population.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Structure of N-terminal domain of NPC1 reveals distinct subdomains for binding and transfer of cholesterol.NPC1蛋白N端结构域的结构揭示了胆固醇结合和转运的不同亚结构域。
Cell. 2009 Jun 26;137(7):1213-24. doi: 10.1016/j.cell.2009.03.049.
3
Extracellular loop C of NPC1L1 is important for binding to ezetimibe.NPC1L1的细胞外环C对于与依泽替米贝的结合很重要。
NPC1L1基因rs217434位点A > G作为韩国人群中与血脂异常相关的新型单核苷酸多态性
Biochem Genet. 2024 Oct;62(5):4103-4119. doi: 10.1007/s10528-023-10649-6. Epub 2024 Jan 27.
4
Binding of Cholesterol to the N-Terminal Domain of the NPC1L1 Transporter: Analysis of the Epimerization-Related Binding Selectivity and Loop Mutations.胆固醇与 NPC1L1 转运蛋白 N 端结构域的结合:差向异构相关结合选择性和环突变分析。
J Chem Inf Model. 2024 Jan 8;64(1):189-204. doi: 10.1021/acs.jcim.3c01319. Epub 2023 Dec 28.
5
PI(4,5)P and Cholesterol: Synthesis, Regulation, and Functions.PI(4,5)P 和胆固醇:合成、调控和功能。
Adv Exp Med Biol. 2023;1422:3-59. doi: 10.1007/978-3-031-21547-6_1.
6
Synthesis, function, and regulation of sterol and nonsterol isoprenoids.固醇和非固醇类异戊二烯的合成、功能及调控
Front Mol Biosci. 2022 Oct 5;9:1006822. doi: 10.3389/fmolb.2022.1006822. eCollection 2022.
7
Cryo-EM structures of NPC1L1 reveal mechanisms of cholesterol transport and ezetimibe inhibition.NPC1L1的冷冻电镜结构揭示了胆固醇转运机制和依泽替米贝抑制作用。
Sci Adv. 2020 Jun 19;6(25):eabb1989. doi: 10.1126/sciadv.abb1989. eCollection 2020 Jun.
8
Inter-domain dynamics drive cholesterol transport by NPC1 and NPC1L1 proteins.域间动力学驱动 NPC1 和 NPC1L1 蛋白进行胆固醇转运。
Elife. 2020 May 15;9:e57089. doi: 10.7554/eLife.57089.
9
Computational Modeling Explains the Multi Sterol Ligand Specificity of the N-Terminal Domain of Niemann-Pick C1-Like 1 Protein.计算建模解释了尼曼-皮克C1样1蛋白N端结构域的多甾醇配体特异性。
ACS Omega. 2019 Dec 3;4(25):20894-20904. doi: 10.1021/acsomega.9b01668. eCollection 2019 Dec 17.
10
Mechanisms and regulation of cholesterol homeostasis.胆固醇稳态的机制和调节。
Nat Rev Mol Cell Biol. 2020 Apr;21(4):225-245. doi: 10.1038/s41580-019-0190-7. Epub 2019 Dec 17.
Proc Natl Acad Sci U S A. 2008 Aug 12;105(32):11140-5. doi: 10.1073/pnas.0800936105. Epub 2008 Aug 5.
4
The cholesterol absorption inhibitor ezetimibe acts by blocking the sterol-induced internalization of NPC1L1.胆固醇吸收抑制剂依折麦布通过阻断固醇诱导的NPC1L1内化发挥作用。
Cell Metab. 2008 Jun;7(6):508-19. doi: 10.1016/j.cmet.2008.04.001.
5
NPC1L1 and SR-BI are involved in intestinal cholesterol absorption from small-size lipid donors.NPC1L1和SR-BI参与从小尺寸脂质供体进行的肠道胆固醇吸收。
Lipids. 2008 May;43(5):401-8. doi: 10.1007/s11745-008-3172-7. Epub 2008 Mar 29.
6
Purified NPC1 protein. I. Binding of cholesterol and oxysterols to a 1278-amino acid membrane protein.纯化的NPC1蛋白。I.胆固醇和氧化甾醇与一种1278个氨基酸的膜蛋白的结合。
J Biol Chem. 2008 Jan 11;283(2):1052-63. doi: 10.1074/jbc.M707943200. Epub 2007 Nov 6.
7
Purified NPC1 protein: II. Localization of sterol binding to a 240-amino acid soluble luminal loop.纯化的NPC1蛋白:II. 固醇结合定位于一个240个氨基酸的可溶性腔内环。
J Biol Chem. 2008 Jan 11;283(2):1064-75. doi: 10.1074/jbc.M707944200. Epub 2007 Nov 6.
8
Do mammalian NPC1 and NPC2 play a role in intestinal cholesterol absorption?哺乳动物的NPC1和NPC2在肠道胆固醇吸收中起作用吗?
Biochem J. 2007 Nov 15;408(1):1-5. doi: 10.1042/BJ20071167.
9
Hepatic Niemann-Pick C1-like 1 regulates biliary cholesterol concentration and is a target of ezetimibe.肝脏尼曼-匹克C1样蛋白1调节胆汁胆固醇浓度,是依泽替米贝的作用靶点。
J Clin Invest. 2007 Jul;117(7):1968-78. doi: 10.1172/JCI30060.
10
Niemann-Pick C1-like 1 overexpression facilitates ezetimibe-sensitive cholesterol and beta-sitosterol uptake in CaCo-2 cells.尼曼-皮克C1样蛋白1的过表达促进了依泽替米贝敏感的胆固醇和β-谷甾醇在CaCo-2细胞中的摄取。
J Pharmacol Exp Ther. 2007 Feb;320(2):559-64. doi: 10.1124/jpet.106.114181. Epub 2006 Nov 29.