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本文引用的文献

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A map of human genome variation from population-scale sequencing.人类基因组变异的图谱来自于基于人群的测序。
Nature. 2010 Oct 28;467(7319):1061-73. doi: 10.1038/nature09534.
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Epigenetic modifications and human disease.表观遗传学修饰与人类疾病。
Nat Biotechnol. 2010 Oct;28(10):1057-68. doi: 10.1038/nbt.1685.
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Massively parallel sequencing and rare disease.大规模并行测序与罕见病。
Hum Mol Genet. 2010 Oct 15;19(R2):R119-24. doi: 10.1093/hmg/ddq390. Epub 2010 Sep 15.
4
Familial isolated clubfoot is associated with recurrent chromosome 17q23.1q23.2 microduplications containing TBX4.家族性孤立性马蹄内翻足与包含 TBX4 的 17q23.1q23.2 微重复的染色体重复有关。
Am J Hum Genet. 2010 Jul 9;87(1):154-60. doi: 10.1016/j.ajhg.2010.06.010.
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Evaluation of embryonic and perinatal myosin gene mutations and the etiology of congenital idiopathic clubfoot.胚胎期和围生期肌球蛋白基因突变评估及先天性特发性马蹄内翻足的病因学研究
J Pediatr Orthop. 2010 Apr-May;30(3):231-4. doi: 10.1097/BPO.0b013e3181d35e3f.
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A method and server for predicting damaging missense mutations.一种预测有害错义突变的方法及服务器。
Nat Methods. 2010 Apr;7(4):248-9. doi: 10.1038/nmeth0410-248.
7
Myosin binding protein C1: a novel gene for autosomal dominant distal arthrogryposis type 1.肌球蛋白结合蛋白 C1:常染色体显性遗传远端型关节挛缩症 1 型的一个新基因。
Hum Mol Genet. 2010 Apr 1;19(7):1165-73. doi: 10.1093/hmg/ddp587. Epub 2010 Jan 2.
8
Arthrogryposis: a review and update.先天性多发性关节挛缩症:综述与更新
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The Sequence Alignment/Map format and SAMtools.序列比对/映射格式和 SAMtools。
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Sheldon-Hall syndrome.谢尔顿-霍尔综合征。
Orphanet J Rare Dis. 2009 Mar 23;4:11. doi: 10.1186/1750-1172-4-11.

外显子组测序在一个家族性远端型关节挛缩症 1 型家系中发现 MYH3 突变。

Exome sequencing identifies an MYH3 mutation in a family with distal arthrogryposis type 1.

机构信息

Department of Orthopaedic Surgery, Washington University School of Medicine, 1 Children's Place, St. Louis, MO 63110, USA.

出版信息

J Bone Joint Surg Am. 2011 Jun 1;93(11):1045-50. doi: 10.2106/JBJS.J.02004.

DOI:10.2106/JBJS.J.02004
PMID:21531865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3102311/
Abstract

BACKGROUND

Few genes responsible for distal arthrogryposis type 1 are known, although genes coding for the proteins in the sarcomere have been implicated in other types of distal arthrogryposis. Cost-effective sequencing methods are now available to examine all genes in the human genome for the purpose of establishing the genetic basis of musculoskeletal disorders.

METHODS

A multigenerational family with distal arthrogryposis type 1 characterized by clubfoot and mild hand contractures was identified, and exome sequencing was performed on DNA from one of the affected family members. Linkage analysis was used to confirm whether a genetic variant segregated with distal arthrogryposis.

RESULTS

Exome sequencing identified 573 novel variants that were not present in control databases. A missense mutation in MYH3 (a gene coding for the heavy chain of myosin), causing an F437I amino acid substitution, was identified that segregated with distal arthrogryposis in this family. Linkage analysis confirmed that this MYH3 mutation was the only exome variant common to all six affected individuals.

CONCLUSIONS

Identification of an MYH3 mutation in this family with distal arthrogryposis type 1 broadens the phenotype associated with MYH3 mutations to include distal arthrogryposis types 1, 2A (Freeman-Sheldon syndrome), and 2B (Sheldon-Hall syndrome). Exome sequencing is a useful and cost-effective method to discover causative genetic mutations, although data from extended families may be needed to confirm the importance of the hundreds of identified variants.

摘要

背景

虽然已经有研究表明编码肌节蛋白的基因与其他类型的远端关节挛缩症有关,但导致 1 型远端关节挛缩症的基因知之甚少。现在已经有了经济有效的测序方法,可以检查人类基因组中的所有基因,以确定肌肉骨骼疾病的遗传基础。

方法

我们鉴定了一个具有 1 型远端关节挛缩症的多代家族,其特征为足内翻和轻度手部挛缩,并对其中一位受影响的家族成员的 DNA 进行了外显子组测序。连锁分析用于确认遗传变异是否与远端关节挛缩症共分离。

结果

外显子组测序鉴定出 573 个不存在于对照数据库中的新变体。发现 MYH3(编码肌球蛋白重链的基因)中的一个错义突变,导致 F437I 氨基酸取代,该突变与这个家族的远端关节挛缩症共分离。连锁分析证实,这个 MYH3 突变是所有 6 位受影响个体共有的唯一外显子变体。

结论

在这个具有 1 型远端关节挛缩症的家族中鉴定出 MYH3 突变,将与 MYH3 突变相关的表型扩展到包括 1 型、2A 型(Freeman-Sheldon 综合征)和 2B 型(Sheldon-Hall 综合征)远端关节挛缩症。外显子组测序是一种有用且具有成本效益的方法,可以发现致病基因突变,尽管可能需要扩展家族的数据来确认数百个鉴定出的变体的重要性。