• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

RNA 编辑和五肽重复基因的进化。

The evolution of RNA editing and pentatricopeptide repeat genes.

机构信息

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, 35 Stirling Highway, Crawley 6009, WA, Australia.

出版信息

New Phytol. 2011 Jul;191(1):37-47. doi: 10.1111/j.1469-8137.2011.03746.x. Epub 2011 May 9.

DOI:10.1111/j.1469-8137.2011.03746.x
PMID:21557747
Abstract

The pentatricopeptide repeat (PPR) is a degenerate 35-amino-acid structural motif identified from analysis of the sequenced genome of the model plant Arabidopsis thaliana. From the wealth of sequence information now available from plant genomes, the PPR protein family is now known to be one of the largest families in angiosperm species, as most genomes encode 400-600 members. As the number of PPR genes is generally only c. 10-20 in other eukaryotic organisms, including green algae, the family has obviously greatly expanded during land plant evolution. This provides a rare opportunity to study selection pressures driving a 50-fold expansion of a single gene family. PPR proteins are sequence-specific RNA-binding proteins involved in many aspects of RNA processing in organelles. In this review, we will summarize our current knowledge about the evolution of PPR genes, and will discuss the relevance of the dramatic expansion in the family to the functional diversification of plant organelles, focusing primarily on RNA editing.

摘要

五肽重复(PPR)是从模式植物拟南芥的测序基因组分析中鉴定出的一种退化的 35 个氨基酸结构基序。从现在植物基因组中大量可用的序列信息来看,PPR 蛋白家族现在被认为是被子植物物种中最大的家族之一,因为大多数基因组编码 400-600 个成员。由于其他真核生物,包括绿藻,其 PPR 基因的数量通常只有约 10-20 个,因此该家族在陆地植物进化过程中显然大大扩张了。这为研究驱动单个基因家族 50 倍扩张的选择压力提供了一个难得的机会。PPR 蛋白是序列特异性的 RNA 结合蛋白,参与细胞器中 RNA 加工的许多方面。在这篇综述中,我们将总结我们目前对 PPR 基因进化的认识,并将讨论该家族的急剧扩张与植物细胞器功能多样化的相关性,主要集中在 RNA 编辑上。

相似文献

1
The evolution of RNA editing and pentatricopeptide repeat genes.RNA 编辑和五肽重复基因的进化。
New Phytol. 2011 Jul;191(1):37-47. doi: 10.1111/j.1469-8137.2011.03746.x. Epub 2011 May 9.
2
The Expansion and Diversification of Pentatricopeptide Repeat RNA-Editing Factors in Plants.植物中五肽重复 RNA 编辑因子的扩展和多样化。
Mol Plant. 2020 Feb 3;13(2):215-230. doi: 10.1016/j.molp.2019.11.002. Epub 2019 Nov 21.
3
Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.重新定义陆地植物中五肽重复蛋白决定 RNA 结合和 RNA 编辑的结构基序。
Plant J. 2016 Feb;85(4):532-47. doi: 10.1111/tpj.13121.
4
Genome-wide analysis of pentatricopeptide-repeat proteins of an aquatic plant.一种水生植物中五肽重复序列蛋白的全基因组分析
Planta. 2016 Oct;244(4):893-9. doi: 10.1007/s00425-016-2555-x. Epub 2016 Jun 15.
5
Pentatricopeptide repeat proteins involved in plant organellar RNA editing.参与植物细胞器RNA编辑的五肽重复蛋白
RNA Biol. 2013;10(9):1419-25. doi: 10.4161/rna.24908. Epub 2013 May 3.
6
On the expansion of the pentatricopeptide repeat gene family in plants.关于植物中五肽重复序列基因家族的扩张
Mol Biol Evol. 2008 Jun;25(6):1120-8. doi: 10.1093/molbev/msn057. Epub 2008 Mar 14.
7
Elucidation of the RNA recognition code for pentatricopeptide repeat proteins involved in organelle RNA editing in plants.阐明植物细胞器 RNA 编辑中涉及的五肽重复蛋白的 RNA 识别密码。
PLoS One. 2013;8(3):e57286. doi: 10.1371/journal.pone.0057286. Epub 2013 Mar 5.
8
Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection.编码五肽重复(PPR)蛋白的基因在植物基因组中的位置并不保守,可能受到多样化选择。
BMC Genomics. 2007 May 23;8:130. doi: 10.1186/1471-2164-8-130.
9
Molecular evolution of pentatricopeptide repeat genes reveals truncation in species lacking an editing target and structural domains under distinct selective pressures.五肽重复基因的分子进化揭示了在缺乏编辑靶标和结构域的物种中存在截短现象,这些结构域受到不同的选择压力的影响。
BMC Evol Biol. 2012 May 14;12:66. doi: 10.1186/1471-2148-12-66.
10
RNA editing in plant organelles: machinery, physiological function and evolution.植物细胞器中的RNA编辑:机制、生理功能及进化
Cell Mol Life Sci. 2006 Mar;63(6):698-708. doi: 10.1007/s00018-005-5449-9.

引用本文的文献

1
Mitochondrial Genome and RNA Editing Tissue Specificity of .线粒体基因组与……的RNA编辑组织特异性
Genes (Basel). 2025 Aug 12;16(8):953. doi: 10.3390/genes16080953.
2
Genome-Wide Association Study on Cowpea seed coat color using RGB images.利用RGB图像对豇豆种皮颜色进行全基因组关联研究。
Mol Breed. 2024 Nov 19;44(12):80. doi: 10.1007/s11032-024-01516-2. eCollection 2024 Dec.
3
Rapidly Evolved Genes in Three Transcriptomes and Potential Roles of Pentatricopeptide Repeat Superfamily Proteins in Endangerment of .三个转录组中快速进化的基因和五肽重复超家族蛋白在濒危物种中的潜在作用。
Int J Mol Sci. 2024 Oct 15;25(20):11065. doi: 10.3390/ijms252011065.
4
Cytoplasmic male sterility-based hybrids: mechanistic insights.基于细胞质雄性不育的杂种:机制见解。
Planta. 2024 Sep 20;260(4):100. doi: 10.1007/s00425-024-04532-w.
5
The CsPPR gene with RNA-editing function involved in leaf color asymmetry of the reciprocal hybrids derived from Cucumis sativus and C. hystrix.具有 RNA 编辑功能的 CsPPR 基因参与了来自黄瓜和苦瓜的正反交杂种叶片不对称性的形成。
Planta. 2024 Sep 20;260(4):102. doi: 10.1007/s00425-024-04513-z.
6
Evolutionary assembly of the plant terrestrialization toolkit from protein domains.植物从蛋白质域到陆地化工具包的进化组装。
Proc Biol Sci. 2024 Jul;291(2027):20240985. doi: 10.1098/rspb.2024.0985. Epub 2024 Jul 31.
7
PPR596 Is Required for Intron Splicing and Complex I Biogenesis in Arabidopsis.PPR596 对于拟南芥的内含子剪接和复合物 I 生物发生是必需的。
Int J Mol Sci. 2024 Mar 21;25(6):3542. doi: 10.3390/ijms25063542.
8
RNA editing events and expression profiles of mitochondrial protein-coding genes in the endemic and endangered medicinal plant, .濒危药用植物中RNA编辑事件及线粒体蛋白质编码基因的表达谱
Front Plant Sci. 2024 Feb 6;15:1332460. doi: 10.3389/fpls.2024.1332460. eCollection 2024.
9
Assembly and comparative analysis of the complete mitochondrial genome of Trigonella foenum-graecum L.蒺藜苜蓿线粒体基因组全序列的组装与比较分析
BMC Genomics. 2023 Dec 8;24(1):756. doi: 10.1186/s12864-023-09865-6.
10
Comparative Genomic Analysis of Asian Cultivated Rice and Its Wild Progenitor () Has Revealed Evolutionary Innovation of the Pentatricopeptide Repeat Gene Family through Gene Duplication.亚洲栽培稻及其野生祖本的比较基因组分析揭示了通过基因重复,五肽重复基因家族的进化创新。
Int J Mol Sci. 2023 Nov 14;24(22):16313. doi: 10.3390/ijms242216313.