Department of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, Pennsylvania 19102, USA.
Biochemistry. 2011 Jun 21;50(24):5521-34. doi: 10.1021/bi200388g. Epub 2011 May 26.
A single basic residue above the si-face of the flavin ring is the site of oxygen activation in glucose oxidase (GOX) (His516) and monomeric sarcosine oxidase (MSOX) (Lys265). Crystal structures of both flavoenzymes exhibit a small pocket at the oxygen activation site that might provide a preorganized binding site for superoxide anion, an obligatory intermediate in the two-electron reduction of oxygen. Chloride binds at these polar oxygen activation sites, as judged by solution and structural studies. First, chloride forms spectrally detectable complexes with GOX and MSOX. The protonated form of His516 is required for tight binding of chloride to oxidized GOX and for rapid reaction of reduced GOX with oxygen. Formation of a binary MSOX·chloride complex requires Lys265 and is not observed with Lys265Met. Binding of chloride to MSOX does not affect the binding of a sarcosine analogue (MTA, methylthioactetate) above the re-face of the flavin ring. Definitive evidence is provided by crystal structures determined for a binary MSOX·chloride complex and a ternary MSOX·chloride·MTA complex. Chloride binds in the small pocket at a position otherwise occupied by a water molecule and forms hydrogen bonds to four ligands that are arranged in approximate tetrahedral geometry: Lys265:NZ, Arg49:NH1, and two water molecules, one of which is hydrogen bonded to FAD:N5. The results show that chloride (i) acts as an oxygen surrogate, (ii) is an effective probe of polar oxygen activation sites, and (iii) provides a valuable complementary tool to the xenon gas method that is used to map nonpolar oxygen-binding cavities.
黄素环的 si-面上方的单个碱性残基是葡萄糖氧化酶(GOX)(His516)和单体肌氨酸氧化酶(MSOX)(Lys265)中氧活化的部位。这两种黄素酶的晶体结构都在氧活化部位显示出一个小口袋,该口袋可能为超氧阴离子提供了一个预先组织的结合位点,超氧阴离子是氧的两电子还原的必需中间产物。根据溶液和结构研究,氯结合在这些极性氧活化部位。首先,氯与 GOX 和 MSOX 形成光谱可检测的复合物。His516 的质子化形式是氧化 GOX 与氯紧密结合以及还原 GOX 与氧快速反应所必需的。形成二元 MSOX·氯复合物需要 Lys265,并且在 Lys265Met 中观察不到。氯结合到 MSOX 不会影响黄素环的 re-面上方的肌氨酸类似物(MTA,甲基硫代乙酸酯)的结合。通过确定二元 MSOX·氯复合物和三元 MSOX·氯·MTA 复合物的晶体结构提供了明确的证据。氯结合在小口袋中,占据了原本被水分子占据的位置,并与排列在近似四面体几何形状的四个配体形成氢键:Lys265:NZ、Arg49:NH1 和两个水分子,其中一个水分子与 FAD:N5 形成氢键。结果表明,氯 (i) 充当氧替代物,(ii) 是极性氧活化部位的有效探针,以及 (iii) 为氙气方法提供了有价值的补充工具,氙气方法用于映射非极性氧结合腔。