Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, 95616, USA.
J Biol Chem. 2011 Jul 1;286(26):23142-9. doi: 10.1074/jbc.M111.244129. Epub 2011 May 13.
RNA-binding proteins (RBPs) form ribonucleoprotein (RNP) complexes that play crucial roles in RNA processing for gene regulation. The angiosperm sieve tube system contains a unique population of transcripts, some of which function as long-distance signaling agents involved in regulating organ development. These phloem-mobile mRNAs are translocated as RNP complexes. One such complex is based on a phloem RBP named Cucurbita maxima RNA-binding protein 50 (CmRBP50), a member of the polypyrimidine track binding protein family. The core of this RNP complex contains six additional phloem proteins. Here, requirements for assembly of this CmRBP50 RNP complex are reported. Phosphorylation sites on CmRBP50 were mapped, and then coimmunoprecipitation and protein overlay studies established that the phosphoserine residues, located at the C terminus of CmRBP50, are critical for RNP complex assembly. In vitro pull-down experiments revealed that three phloem proteins, C. maxima phloem protein 16, C. maxima GTP-binding protein, and C. maxima phosphoinositide-specific phospholipase-like protein, bind directly with CmRBP50. This interaction required CmRBP50 phosphorylation. Gel mobility-shift assays demonstrated that assembly of the CmRBP50-based protein complex results in a system having enhanced binding affinity for phloem-mobile mRNAs carrying polypyrimidine track binding motifs. This property would be essential for effective long-distance translocation of bound mRNA to the target tissues.
RNA 结合蛋白 (RBPs) 形成核糖核蛋白 (RNP) 复合物,在基因调控的 RNA 加工中发挥着关键作用。被子植物筛管系统包含一组独特的转录本,其中一些作为长距离信号转导剂参与调节器官发育。这些韧皮部移动的 mRNA 作为 RNP 复合物被转运。这样的复合物之一是基于一种称为南瓜 RNA 结合蛋白 50(CmRBP50)的韧皮部 RBP,它是多嘧啶跟踪结合蛋白家族的成员。该 RNP 复合物的核心包含另外六个韧皮部蛋白。在这里,报告了组装这种 CmRBP50 RNP 复合物的要求。对 CmRBP50 的磷酸化位点进行了作图,然后共免疫沉淀和蛋白质覆盖研究表明,位于 CmRBP50 C 末端的磷酸丝氨酸残基对于 RNP 复合物的组装至关重要。体外下拉实验表明,三种韧皮部蛋白,南瓜韧皮部蛋白 16、南瓜 GTP 结合蛋白和南瓜磷酸肌醇特异性磷脂酶样蛋白,与 CmRBP50 直接结合。这种相互作用需要 CmRBP50 磷酸化。凝胶迁移率变动分析表明,基于 CmRBP50 的蛋白质复合物的组装导致系统对携带多嘧啶跟踪结合基序的韧皮部移动 mRNA 的结合亲和力增强。这种特性对于有效长距离转运结合的 mRNA 到靶组织是必不可少的。