• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

苯丙氨酸衍生的海鞘素的方型构象通过氨基酸侧链之间的 CH/π 相互作用得到稳定。

The square conformation of phenylglycine-incorporated ascidiacyclamide is stabilized by CH/π interactions between amino acid side chains.

机构信息

Osaka University of Pharmaceutical Sciences, 4-20-1, Nasahara, Takatsuki, Osaka 569-1094, Japan.

出版信息

Bioorg Med Chem. 2011 Jun 1;19(11):3372-7. doi: 10.1016/j.bmc.2011.04.036. Epub 2011 Apr 22.

DOI:10.1016/j.bmc.2011.04.036
PMID:21592800
Abstract

We designed a phenylglycine (Phg)-incorporated ascidiacyclamide (ASC) analogue, cyclo(-Phg-oxazoline-d-Val-thiazole-Ile-oxazoline-d-Val-thiazole- ([Phg]ASC), with the aim of stabilizing the square conformation of ASC through interactions between amino acid side chains. X-ray diffraction analysis showed that [Phg]ASC has a square structure, similar to ASC, in which the sec-butyl group of Ile and the benzene ring of Phg are in close proximity. Consistent with that finding, ¹H NMR experiments revealed significant high-field shifts in the sec-butyl group of Ile, which suggests a potential for CH/π interactions between the sec-butyl group of Ile and the benzene ring of Phg. The CD spectra of [Phg]ASC were less affected by TFE titration or increasing temperature than those of ASC. In addition, [Phg]ASC showed approximately three times greater toxicity toward HL-60 cells than ASC. Thus the potently cytotoxic conformation of [Phg]ASC may be stabilized by CH/π interactions between the side chains of the Ile and Phg residues.

摘要

我们设计了一种苯甘氨酸(Phg)掺入的海鞘素(ASC)类似物,环(Phg-噁唑啉-d-Val-噻唑-Ile-噁唑啉-d-Val-噻唑-([Phg]ASC),旨在通过氨基酸侧链之间的相互作用稳定 ASC 的方形构象。X 射线衍射分析表明,[Phg]ASC 具有类似于 ASC 的方形结构,其中 Ile 的仲丁基和 Phg 的苯环非常接近。与这一发现一致,¹H NMR 实验表明 Ile 的仲丁基发生了显著的高场位移,这表明 Ile 的仲丁基和 Phg 的苯环之间可能存在 CH/π 相互作用。与 ASC 相比,[Phg]ASC 的 CD 光谱受 TFE 滴定或升高温度的影响较小。此外,[Phg]ASC 对 HL-60 细胞的毒性比 ASC 大约强三倍。因此,[Phg]ASC 的强效细胞毒性构象可能通过 Ile 和 Phg 残基的侧链之间的 CH/π 相互作用得到稳定。

相似文献

1
The square conformation of phenylglycine-incorporated ascidiacyclamide is stabilized by CH/π interactions between amino acid side chains.苯丙氨酸衍生的海鞘素的方型构象通过氨基酸侧链之间的 CH/π 相互作用得到稳定。
Bioorg Med Chem. 2011 Jun 1;19(11):3372-7. doi: 10.1016/j.bmc.2011.04.036. Epub 2011 Apr 22.
2
Conformational change of ascidiacyclamide caused by asymmetric modification for an isoleucine residue: structural analyses of [Gly], [Leu], and [Phe]ascidiacyclamides by x-ray diffraction and NMR spectroscopy.异亮氨酸残基不对称修饰引起的海鞘环肽构象变化:通过X射线衍射和核磁共振光谱对[甘氨酸]、[亮氨酸]和[苯丙氨酸]海鞘环肽的结构分析
Biopolymers. 1999 May;49(6):459-69. doi: 10.1002/(SICI)1097-0282(199905)49:6<459::AID-BIP4>3.0.CO;2-G.
3
Ascidiacyclamides containing oxazoline and thiazole motifs assume square conformations and show high cytotoxicity.含有恶唑啉和噻唑基序的海鞘酰胺呈方形构象并表现出高细胞毒性。
J Pept Sci. 2018 Oct;24(10):e3120. doi: 10.1002/psc.3120. Epub 2018 Sep 17.
4
Effect of asymmetric modification on the conformation of ascidiacyclamide analogs.
J Pept Res. 2002 Jul;60(1):10-22. doi: 10.1034/j.1399-3011.2002.02981.x.
5
Effects of amino acids and chirality for molecular folding of desoxazoline-ascidiacyclamide derivatives: X-ray crystal structures of four cyclic octapeptides including unusual amino acids, cyclo(-Ile-aThr-D-Val-Thz-)(2), cyclo(-Ala-aThr-D-Val-Thz-Ile-aThr-D-Val-Thz-), cyclo(-Val-aThr-D-Val-Thz-Ile-aThr-D-Val-Thz-), and cyclo(-Ile-aThr-Val-Thz-Ile-aThr-D-Val-Thz-).氨基酸和手性对去氧唑啉-海鞘环肽酰胺衍生物分子折叠的影响:四种环八肽的X射线晶体结构,包括不寻常氨基酸的环(-异亮氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-)(2)、环(-丙氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-异亮氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-)、环(-缬氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-异亮氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-)和环(-异亮氨酸-α-苏氨酸-缬氨酸-噻唑啉-异亮氨酸-α-苏氨酸-D-缬氨酸-噻唑啉-) 。
Biopolymers. 2001 Mar;58(3):295-304. doi: 10.1002/1097-0282(200103)58:3<295::AID-BIP1006>3.0.CO;2-X.
6
Conformational properties of ascydiacyclamide analogues with cyclic α-amino acids instead of oxazoline residues.
Bioorg Med Chem. 2017 Dec 15;25(24):6554-6562. doi: 10.1016/j.bmc.2017.10.029. Epub 2017 Oct 26.
7
Cyclo(-Cha-Oxz-D-Val-Thz-Ile-Oxz-D-Val-Thz-) N,N-dimethylacetamide dihydrate: a square form of cyclohexylalanine-incorporated ascidiacyclamide having the strongest cytotoxicity.环(-环己基丙氨酸-氧杂环丁烷-D-缬氨酸-噻唑-异亮氨酸-氧杂环丁烷-D-缬氨酸-噻唑-)N,N-二甲基乙酰胺二水合物:一种掺入环己基丙氨酸的海鞘环肽的方形形式,具有最强的细胞毒性。
Acta Crystallogr C. 2003 Sep;59(Pt 9):o488-90. doi: 10.1107/s0108270103014495. Epub 2003 Aug 9.
8
Experimental evidence for CH⋯π interaction-mediated stabilization of the square form in phenylglycine-incorporated ascidiacyclamide.苯基甘氨酸掺入的海鞘环肽中,CH⋯π相互作用介导方形结构稳定的实验证据。
RSC Adv. 2023 Jan 20;13(4):2458-2466. doi: 10.1039/d2ra07063d. eCollection 2023 Jan 11.
9
Modulating the structure of phenylalanine-incorporated ascidiacyclamide through fluorination.通过氟化调节含苯丙氨酸的海鞘环肽的结构。
J Pept Sci. 2014 Oct;20(10):794-802. doi: 10.1002/psc.2668. Epub 2014 Jul 1.
10
A flat squared conformation of an ascidiacyclamide derivative caused by chiral modification of an oxazoline residue.
Biochem Biophys Res Commun. 2002 Sep 13;297(1):143-7. doi: 10.1016/s0006-291x(02)02088-0.

引用本文的文献

1
Electronic substituent effect on the conformation of a phenylalanine-incorporated cyclic peptide.电子取代基对含苯丙氨酸环肽构象的影响。
RSC Adv. 2024 Jan 2;14(2):1062-1071. doi: 10.1039/d3ra07836a.
2
Experimental evidence for CH⋯π interaction-mediated stabilization of the square form in phenylglycine-incorporated ascidiacyclamide.苯基甘氨酸掺入的海鞘环肽中,CH⋯π相互作用介导方形结构稳定的实验证据。
RSC Adv. 2023 Jan 20;13(4):2458-2466. doi: 10.1039/d2ra07063d. eCollection 2023 Jan 11.
3
NMR-based quantitative studies of the conformational equilibrium between their square and folded forms of ascidiacyclamide and its analogues.
基于核磁共振的海鞘环肽及其类似物方形和折叠形式之间构象平衡的定量研究。
RSC Adv. 2020 Sep 9;10(55):33317-33326. doi: 10.1039/d0ra07396b. eCollection 2020 Sep 7.